Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   KI216_RS14505 Genome accession   NZ_AP024595
Coordinates   3074401..3076623 (+) Length   740 a.a.
NCBI ID   WP_005007081.1    Uniprot ID   N9CEI9
Organism   Acinetobacter bouvetii strain JCM 18991     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3069401..3081623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI216_RS14480 (ACBO_28080) lnt 3069610..3071169 (+) 1560 WP_005007091.1 apolipoprotein N-acyltransferase -
  KI216_RS14485 (ACBO_28090) - 3071253..3071591 (-) 339 WP_005007089.1 tRNA-binding protein -
  KI216_RS14490 (ACBO_28100) - 3071840..3072175 (-) 336 WP_005007086.1 hypothetical protein -
  KI216_RS14495 (ACBO_28110) gspG 3072458..3072961 (-) 504 WP_005007084.1 type II secretion system major pseudopilin GspG -
  KI216_RS14500 (ACBO_28120) gspF 3073044..3074249 (-) 1206 WP_005007082.1 type II secretion system inner membrane protein GspF -
  KI216_RS14505 (ACBO_28130) priA 3074401..3076623 (+) 2223 WP_005007081.1 primosomal protein N' Machinery gene
  KI216_RS14510 (ACBO_28140) - 3076691..3078535 (+) 1845 WP_005007076.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  KI216_RS14515 (ACBO_28150) - 3078586..3079461 (+) 876 WP_005007075.1 Hsp33 family molecular chaperone HslO -
  KI216_RS14520 (ACBO_28160) - 3079696..3080148 (+) 453 WP_005007072.1 DUF2147 domain-containing protein -
  KI216_RS14525 (ACBO_28170) - 3080459..3080917 (+) 459 WP_005007071.1 DUF2147 domain-containing protein -
  KI216_RS14530 (ACBO_28180) - 3081092..3081556 (+) 465 WP_005007069.1 DUF2147 domain-containing protein -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83398.31 Da        Isoelectric Point: 8.7629

>NTDB_id=86319 KI216_RS14505 WP_005007081.1 3074401..3076623(+) (priA) [Acinetobacter bouvetii strain JCM 18991]
MQVSAPAPNTVYRVRVAVPVYLYDCFDYSLSFEQYQQAQIGARVAISFGRQNLIGVITDKLAPDAPLDPSIKLKAITELL
DDQAILDGKVLSLLTWASQYYQFPIGEVIQSALPALLRQGKPYNLLARTWKLLDDDAESKIKRSERQQEAYKVLKLHPSG
TAENLLNLAGVETATLKALEKKGICECVLDAQDFSPMPVSMAQMPLTANPDQKKAIESILKARKKYQAFLLDGLTGSGKT
EVYLQVMQDVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCNIALLHSGLNDSKRLQAWQAAQTGKASIILGTRSAIFTPL
PNLGLIVLDEEHDLSFKQQEGFRYHARDIALYRGHLEQCPVVLGSATPSIDSYALVQNGKMSCLELNQRAGSALMPKIHI
LDLKVAQKQHGISQMLLEEMKKRLDKKEQVLVFLNRRGYAPVLICESCAWQAKCPHCDANFTVHRTPYQHLHCHHCGTIH
RMPSHCPQCSHTELKSIGMGTAKVEDSLNELFPDYDVIRVDRDSTSRVGSWQKIYDKIQKSEPAILLGTQMLAKGHHFPY
VTLGAILDIDSGLLSVDFRATERTAQLVVQVAGRAGRGERKGDVYLQTLRPEHPLLNTLVQEDYRQFAKQTLKERQAALM
PPFRYAALIRCESKDQKLNTDFLQQHAQLLRQNSEHSVDIWGPIPAPMERKAGRYQSHMVLLSADRARLHFYIRHWWLNM
LHQKPSTMKLSLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=86319 KI216_RS14505 WP_005007081.1 3074401..3076623(+) (priA) [Acinetobacter bouvetii strain JCM 18991]
ATGCAAGTTTCAGCCCCTGCCCCAAACACGGTTTACCGGGTCCGCGTTGCCGTTCCAGTCTATCTGTATGACTGTTTTGA
CTATAGCCTGAGCTTCGAACAATACCAGCAGGCGCAAATTGGCGCACGGGTGGCCATATCATTTGGCCGGCAGAATTTAA
TCGGGGTGATCACAGATAAGCTGGCGCCGGATGCGCCGCTGGACCCCTCAATCAAACTCAAAGCCATTACTGAATTGCTG
GATGATCAGGCCATTTTAGACGGCAAAGTTTTAAGTTTGCTGACATGGGCTTCGCAATATTATCAATTTCCCATTGGCGA
AGTCATTCAAAGCGCTTTGCCTGCGCTGCTGCGCCAAGGCAAGCCCTATAATTTATTGGCGCGCACATGGAAACTGCTGG
ATGATGATGCCGAGAGCAAAATTAAGCGCTCAGAACGGCAGCAGGAAGCCTATAAAGTATTAAAGCTGCACCCTTCAGGC
ACGGCAGAAAATTTGCTGAATTTAGCCGGTGTTGAAACAGCAACATTAAAAGCGCTGGAGAAAAAAGGCATTTGCGAATG
CGTACTGGACGCGCAGGATTTCAGCCCCATGCCGGTCAGCATGGCGCAGATGCCCCTGACCGCAAATCCAGACCAGAAAA
AAGCCATTGAAAGCATCCTGAAAGCGCGTAAAAAATATCAAGCCTTTCTACTGGATGGCTTAACCGGCAGCGGCAAAACC
GAAGTCTATCTGCAAGTGATGCAGGACGTGCTGAAGCAAGGCAAGCAGGTGCTGGTTCTGGTGCCTGAAATTGGCCTGAC
GCCGCAAACCATCAGCCGCTTTCAGTCCCGCTTTCACTGCAATATTGCCCTGCTGCATTCCGGCTTAAATGACTCCAAGC
GGCTGCAGGCCTGGCAAGCGGCGCAAACGGGCAAAGCCTCGATTATTTTAGGCACCCGCTCAGCCATCTTTACCCCGCTG
CCGAATTTAGGACTGATCGTTTTAGATGAGGAGCATGACCTGTCCTTTAAGCAGCAGGAAGGCTTCCGCTACCATGCGCG
GGATATTGCACTGTACCGCGGCCATCTGGAACAGTGTCCCGTGGTGCTGGGATCGGCTACGCCCAGCATCGACAGCTACG
CGCTGGTGCAGAATGGCAAAATGAGCTGTTTGGAGCTGAATCAGCGCGCAGGCTCCGCACTGATGCCGAAGATTCATATT
CTGGATTTAAAAGTAGCGCAGAAGCAGCACGGCATCAGCCAAATGCTGCTGGAAGAAATGAAAAAGCGCCTGGACAAAAA
AGAACAGGTGCTGGTGTTTTTAAACCGGCGCGGCTATGCGCCGGTGCTGATTTGCGAAAGCTGCGCCTGGCAGGCCAAAT
GCCCGCACTGCGATGCCAACTTTACCGTGCACCGTACGCCTTATCAGCATTTGCACTGCCACCACTGCGGCACCATTCAC
CGCATGCCCAGCCATTGCCCGCAGTGCAGCCATACAGAATTGAAATCGATTGGCATGGGCACCGCCAAGGTTGAAGACAG
CCTGAATGAACTGTTTCCTGATTATGATGTGATCCGGGTTGACCGCGATTCAACCAGCCGCGTCGGCAGCTGGCAGAAGA
TTTACGATAAAATTCAAAAGAGCGAGCCTGCAATTTTACTGGGAACACAAATGCTGGCCAAAGGCCATCACTTCCCGTAT
GTGACTTTGGGGGCGATTTTAGACATCGACTCCGGGCTGCTGAGCGTCGACTTCCGCGCGACGGAACGCACTGCGCAGCT
GGTGGTGCAAGTGGCGGGACGCGCGGGGCGCGGTGAGCGCAAAGGCGACGTCTATCTGCAGACCCTGCGTCCAGAGCATC
CGCTGCTGAATACACTGGTGCAGGAAGACTACCGCCAGTTTGCCAAGCAGACGCTGAAAGAGCGCCAAGCTGCGCTGATG
CCGCCGTTCCGTTATGCCGCGCTGATCCGCTGCGAATCGAAAGATCAAAAACTGAACACAGATTTTTTACAGCAGCATGC
CCAGCTTTTAAGGCAAAATTCGGAACATAGCGTAGACATCTGGGGTCCGATTCCAGCGCCGATGGAACGCAAGGCCGGAC
GCTATCAGTCCCATATGGTGCTGCTGTCCGCAGACCGCGCCAGGCTGCATTTCTATATCCGGCACTGGTGGCTGAATATG
CTTCATCAGAAGCCTTCCACTATGAAACTGAGTTTAGACATTGACCCGCAGGAACTGAGTTAA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(210-371)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9CEI9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

70.889

100

0.711

Multiple sequence alignment