Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   KI216_RS02335 Genome accession   NZ_AP024595
Coordinates   489222..490100 (+) Length   292 a.a.
NCBI ID   WP_018572800.1    Uniprot ID   -
Organism   Acinetobacter bouvetii strain JCM 18991     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 484222..495100
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI216_RS02305 (ACBO_04400) - 484442..484834 (-) 393 WP_005012906.1 hypothetical protein -
  KI216_RS02310 (ACBO_04410) - 485005..485592 (-) 588 WP_018572803.1 hypothetical protein -
  KI216_RS02315 (ACBO_04420) - 485576..486649 (-) 1074 WP_005012902.1 DUF262 domain-containing protein -
  KI216_RS02320 (ACBO_04430) - 486746..487321 (-) 576 WP_005012899.1 xanthine phosphoribosyltransferase -
  KI216_RS02325 (ACBO_04440) - 487411..488124 (-) 714 WP_005012897.1 DUF3108 domain-containing protein -
  KI216_RS02330 (ACBO_04450) - 488297..488980 (-) 684 WP_005012895.1 hypothetical protein -
  KI216_RS02335 (ACBO_04460) tonB2 489222..490100 (+) 879 WP_018572800.1 energy transducer TonB Machinery gene
  KI216_RS02340 - 490140..490550 (-) 411 WP_026253387.1 hypothetical protein -
  KI216_RS02345 (ACBO_04480) - 490781..491083 (-) 303 WP_005012889.1 antibiotic biosynthesis monooxygenase family protein -
  KI216_RS02350 (ACBO_04490) ybeY 491183..491668 (-) 486 WP_005012886.1 rRNA maturation RNase YbeY -
  KI216_RS02355 (ACBO_04500) - 491678..492763 (-) 1086 WP_005012884.1 PhoH family protein -
  KI216_RS02360 (ACBO_04510) miaB 492801..494258 (-) 1458 WP_005012881.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33241.06 Da        Isoelectric Point: 9.4538

>NTDB_id=86301 KI216_RS02335 WP_018572800.1 489222..490100(+) (tonB2) [Acinetobacter bouvetii strain JCM 18991]
MLKKMTFKPLIQDWWKDPIFTGALGLAAVLHLTVLTLQFAMPQESDVTTKEIAVSLRPSESKVDDADFLAQADQQGSGKF
REAHRMATDMPAPMVDQAAGEQRQETLEKMQQKRELNFEEKVLMTTLSWQKQAEENKRKKAVDEMQSQFQAKAAMIASIE
AQYLQRQQNFSRLQKIKTIDGIQAKQDNTAAYMEKFRQKVEFYGNRYYPDAAKQQRLAGEVRLMVILNSSGGIRAIRLID
SSGHAMLDEAAKTSVRKAAPFGGFDAKMKDVSELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 879 bp        

>NTDB_id=86301 KI216_RS02335 WP_018572800.1 489222..490100(+) (tonB2) [Acinetobacter bouvetii strain JCM 18991]
ATGCTGAAAAAAATGACCTTTAAGCCTTTAATTCAAGACTGGTGGAAAGACCCGATTTTTACCGGTGCATTAGGCTTGGC
TGCGGTTTTGCATTTAACTGTCTTAACGCTGCAATTTGCCATGCCGCAAGAAAGTGATGTGACGACCAAAGAAATTGCGG
TTTCCTTGCGTCCCAGTGAAAGCAAGGTGGATGATGCAGACTTTTTAGCGCAGGCCGATCAGCAGGGTTCGGGCAAGTTC
CGTGAAGCGCACCGTATGGCGACAGATATGCCTGCGCCTATGGTGGATCAGGCTGCCGGGGAACAGCGGCAGGAAACGCT
GGAAAAAATGCAGCAGAAGCGCGAGCTGAATTTTGAAGAAAAGGTGCTAATGACGACCCTGAGCTGGCAGAAGCAGGCTG
AGGAGAATAAGCGCAAAAAAGCGGTTGATGAAATGCAGAGCCAATTTCAGGCGAAAGCTGCCATGATTGCCAGCATTGAA
GCGCAATACCTGCAGCGCCAGCAGAATTTCAGCCGCCTGCAGAAAATCAAAACCATTGACGGCATTCAGGCCAAGCAGGA
CAACACTGCAGCTTATATGGAAAAATTCCGTCAAAAAGTCGAATTCTACGGCAACCGCTACTACCCAGATGCAGCCAAGC
AGCAGCGCTTAGCTGGCGAAGTGCGGCTGATGGTGATTCTTAACAGTAGCGGCGGTATCCGCGCAATCCGCTTAATTGAC
AGTTCAGGGCATGCCATGCTGGATGAGGCGGCGAAAACATCCGTCCGCAAAGCTGCGCCTTTTGGCGGTTTTGATGCCAA
AATGAAAGACGTTTCAGAACTGCGCATTGTGCGCACTTGGCGTTTTGATCCAGCCGAAGCCGAGTTTGAAGTGCATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-269)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

69.831

100

0.705

Multiple sequence alignment