Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   KI216_RS00850 Genome accession   NZ_AP024595
Coordinates   191920..193074 (-) Length   384 a.a.
NCBI ID   WP_005012043.1    Uniprot ID   N9C8B8
Organism   Acinetobacter bouvetii strain JCM 18991     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 186920..198074
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI216_RS00825 (ACBO_01580) - 187068..187613 (-) 546 WP_005012049.1 glutathione peroxidase -
  KI216_RS00830 (ACBO_01590) - 187951..188730 (-) 780 WP_005012048.1 helix-turn-helix transcriptional regulator -
  KI216_RS00835 (ACBO_01600) - 188857..189768 (+) 912 WP_005012047.1 DMT family transporter -
  KI216_RS00840 (ACBO_01610) - 190149..190718 (-) 570 WP_005012046.1 Sua5/YciO/YrdC/YwlC family protein -
  KI216_RS00845 (ACBO_01620) dprA 190761..191900 (-) 1140 WP_005012044.1 DNA-processing protein DprA Machinery gene
  KI216_RS00850 (ACBO_01630) tsaP 191920..193074 (-) 1155 WP_005012043.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  KI216_RS00855 (ACBO_01640) def 193194..193724 (+) 531 WP_005012041.1 peptide deformylase -
  KI216_RS00860 (ACBO_01650) - 193822..194262 (+) 441 WP_005012039.1 DUF2946 family protein -
  KI216_RS00865 (ACBO_01660) - 194338..196410 (+) 2073 WP_005012036.1 TonB-dependent copper receptor -
  KI216_RS00870 (ACBO_01670) - 196478..197683 (-) 1206 WP_005012033.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 41819.20 Da        Isoelectric Point: 9.2791

>NTDB_id=86287 KI216_RS00850 WP_005012043.1 191920..193074(-) (tsaP) [Acinetobacter bouvetii strain JCM 18991]
MKKVLKGMPTFSALGFKKQLLALAVCLSIGAGIASVAEAAPARNVNPPALKAGAPQVYVVKKGDTLWDISKKFLKNPVRW
PEIWASNKHVKNPHWIFPGDRLLMCTHNGKPLIGKDEGDGCEGIIRRYTGGTKMQPQVRIESLNNAIPVIPLEYIKQWLE
RSMVVAPETLENTPYILGTADQRVLAAKGQTVYARGNGMAVGQRYAIYREGEPYNLTDANGKKFNAGLELNQVASGIAVR
GENDIVTLELTDTYNGEVRRGDRVLPEYDPMLPTLFYPTNAENITAGGSIIRVMGSISTAAVNSVVTIDRGALQGVEAGQ
VFSANQKGEIVTDPKTKERIQLPGQRVGTIMVFKTFDNLSYAYVLDSDLPIKVGASIQPPLLDE

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=86287 KI216_RS00850 WP_005012043.1 191920..193074(-) (tsaP) [Acinetobacter bouvetii strain JCM 18991]
ATGAAAAAGGTTTTGAAGGGCATGCCAACTTTTAGTGCCTTGGGGTTTAAAAAACAATTATTAGCGCTTGCCGTCTGCCT
AAGCATTGGGGCTGGCATCGCCAGCGTTGCTGAAGCAGCGCCTGCCCGCAATGTCAATCCGCCCGCATTGAAAGCTGGCG
CGCCGCAAGTGTATGTGGTGAAAAAAGGCGATACGCTGTGGGATATTTCCAAAAAATTCTTGAAAAATCCAGTCCGCTGG
CCTGAAATTTGGGCAAGCAATAAACACGTCAAAAACCCGCACTGGATTTTCCCTGGTGACCGTTTATTGATGTGCACTCA
TAACGGCAAGCCACTCATCGGCAAAGATGAAGGCGATGGCTGTGAAGGCATCATCCGCCGCTATACGGGCGGCACTAAAA
TGCAGCCTCAGGTGCGCATCGAATCATTAAATAATGCGATTCCCGTCATTCCTTTGGAATATATCAAGCAATGGCTGGAA
CGCAGCATGGTAGTCGCACCTGAAACGCTGGAAAATACGCCCTATATTTTAGGCACTGCCGATCAGCGCGTACTGGCGGC
GAAAGGCCAGACTGTTTATGCTCGCGGCAATGGCATGGCTGTAGGCCAGCGCTATGCAATCTACCGTGAAGGCGAACCGT
ATAACTTGACTGATGCAAATGGCAAAAAATTCAATGCCGGCCTAGAGTTAAATCAAGTGGCTTCAGGCATTGCTGTACGC
GGTGAAAATGACATCGTCACACTGGAACTGACCGATACTTATAATGGCGAAGTCCGCCGCGGTGACCGCGTTCTGCCTGA
ATATGACCCAATGCTGCCAACCTTGTTCTATCCAACCAATGCTGAAAACATTACAGCAGGCGGCAGCATAATCCGTGTTA
TGGGCTCAATCAGCACTGCAGCAGTCAACAGCGTCGTAACGATTGACCGCGGCGCGCTGCAAGGCGTTGAAGCTGGCCAG
GTGTTCAGCGCAAACCAAAAAGGCGAGATTGTGACTGATCCAAAAACCAAGGAACGTATTCAGCTCCCAGGCCAGCGGGT
TGGAACAATTATGGTTTTCAAAACTTTTGACAACCTTAGCTATGCTTATGTCTTAGACAGTGATTTGCCAATCAAAGTCG
GCGCCAGCATTCAGCCTCCGCTTTTGGATGAATAA

Domains


Predicted by InterproScan.

(58-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9C8B8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

67.358

100

0.677


Multiple sequence alignment