Detailed information NTG0862745

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: WDM00_RS00960
• Genome accession: NZ_CP147726
• Coordinates: 196471..197871 (-)
• Length: 466 a.a.
• NCBI ID: WP_001914450.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain CNCTC 6536
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 191471..202871

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WDM00_RS00950 (WDM00_00950)	add	192785..193789 (-)	1005	WP_088131603.1	adenosine deaminase	-
WDM00_RS00955 (WDM00_00955)	-	193881..196412 (-)	2532	WP_185841319.1	EAL domain-containing protein	-
WDM00_RS00960 (WDM00_00960)	luxO	196471..197871 (-)	1401	WP_001914450.1	nitrogen regulation protein NR(I)	Regulator
WDM00_RS00965 (WDM00_00965)	glnL	197881..198939 (-)	1059	WP_044127736.1	nitrogen regulation protein NR(II)	-
WDM00_RS00970 (WDM00_00970)	-	199078..199668 (-)	591	WP_142737559.1	DUF4124 domain-containing protein	-
WDM00_RS00975 (WDM00_00975)	glnA	199846..201255 (-)	1410	WP_000110151.1	glutamate--ammonia ligase	-
WDM00_RS00980 (WDM00_00980)	-	201400..201723 (+)	324	WP_000244707.1	hypothetical protein	-

Sequence

Protein

• Length: 466 a.a.
• Molecular weight: 52345.84 Da
• Isoelectric Point: 6.5999

>NTDB_id=862745 WDM00_RS00960 WP_001914450.1 196471..197871(-) (luxO) [Vibrio cholerae strain CNCTC 6536]
MSRGYVWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIALLNQVHQRTPELPVII
MTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQRKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSR
SSISVLINGESGTGKELVAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLD
EIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVIRIHIPSLRERRQDIE
KLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDIS
WQKQLETWAKSALASGETELLAYALPEFERILLEAALHYTNGHKQEAAKVLGWGRNTLTRKLKELY

Nucleotide

• Length: 1401 bp

>NTDB_id=862745 WDM00_RS00960 WP_001914450.1 196471..197871(-) (luxO) [Vibrio cholerae strain CNCTC 6536]
ATGAGTAGAGGATACGTCTGGGTTGTCGATGATGATAGTTCCATTCGCTGGGTAATGGAGAAAACGCTCTCTTCAGCCCA
TATAAAATGCGAAACCTTCGCAGATGCGGAAAGCGTACTGCTGGCACTGGAGCGTGAAACCCCCGACGTTCTCGTCTCAG
ACATTCGCATGCCAGGGATGGATGGCATTGCTCTGCTCAATCAAGTGCACCAACGCACCCCTGAACTTCCGGTGATCATT
ATGACCGCGCATTCGGATCTGGATGCCGCCGTCAATGCCTACCAACAAGGTGCCTTTGAGTATCTTCCCAAGCCTTTTGA
TGTCGATGAAACCCTCACCTTAGTCGAACGCGCCATCGCTCATGGTCAAGAGCAGCGTAAGACATCTCATCGTCCCAGTG
AGAACTATTCTGCCCCTGAAATCATTGGCGAAGCACCGGCTATGCAAGAAGTGTTTCGCGCAATTGGTCGCTTATCTCGC
TCTTCGATTTCGGTATTGATCAACGGTGAATCGGGAACCGGTAAAGAATTGGTCGCTCATGCTCTGCATAGACACAGCCC
TCGTGCCCAAAAGCCGTTTATTGCCCTCAACATGGCGGCGATTCCCAAAGATCTCATCGAATCTGAACTGTTTGGCCACG
AAAAAGGCGCGTTTACTGGTGCTAATACCGTGCGTCAAGGTCGCTTCGAACAAGCCAATGGCGGCACTTTATTTCTTGAT
GAAATTGGCGATATGCCGCTCGATATTCAAACTCGGTTATTGCGCGTGTTGGCGGATGGTCAGTTTTATCGCGTTGGCGG
TCATGTCGCGATAAAAGTCGATGTGCGAATCGTCGCAGCCACTCACCAAAATCTTGAAAAACTGGTTCATCAAGGCAAAT
TTCGTGAAGACTTATTCCATCGTCTGAACGTTATTCGCATCCATATCCCGTCACTGCGTGAACGTCGACAAGATATTGAA
AAGCTCACTAAGCACTTTTTAGCGCTGGCAGCCAAAGAGCTCGGAGTGGAGATGAAAACGCTCAACCCGCGCACCGTGGA
TATTCTGACCAAGCTCGATTGGCCGGGTAACGTACGCCAACTCGAAAACATGTGTCGCTGGCTCACGGTGATGGCAAGTG
GAAGTGAAGTGCTGCCAAGTGATCTTCCTTCCGAATTATTATCAGAAAGGAAAGCCAGCCATTTTGATAATGATATAAGT
TGGCAGAAACAGTTAGAAACATGGGCAAAATCTGCACTGGCCTCCGGTGAAACCGAGTTGCTTGCCTACGCACTCCCAGA
ATTTGAACGTATACTTTTAGAAGCGGCACTTCACTACACCAATGGACATAAACAAGAAGCCGCCAAAGTATTGGGCTGGG
GACGGAATACGCTAACACGTAAACTCAAAGAGTTATATTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory protein, Fis family (HTH_8) (425-465)

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (141-308)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	37.662	99.142	0.373
pilR	Pseudomonas aeruginosa PAK	37.419	99.785	0.373