Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   KI212_RS07490 Genome accession   NZ_AP024589
Coordinates   1554881..1555927 (-) Length   348 a.a.
NCBI ID   WP_059107799.1    Uniprot ID   A0AAP8PP74
Organism   Staphylococcus auricularis strain JCM 2421     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1549881..1560927
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI212_RS07460 (JCM2421_14890) - 1550898..1551101 (-) 204 WP_059107805.1 DUF1128 domain-containing protein -
  KI212_RS07465 (JCM2421_14900) - 1551233..1551697 (+) 465 WP_059107804.1 low molecular weight protein-tyrosine-phosphatase -
  KI212_RS07470 (JCM2421_14910) - 1551703..1551987 (+) 285 WP_059107803.1 YtxH domain-containing protein -
  KI212_RS07475 (JCM2421_14920) - 1552312..1553487 (+) 1176 WP_059107802.1 YihY/virulence factor BrkB family protein -
  KI212_RS07480 (JCM2421_14930) - 1553603..1554181 (+) 579 WP_059107801.1 beta-class carbonic anhydrase -
  KI212_RS07485 (JCM2421_14940) vraR 1554262..1554891 (-) 630 WP_059107800.1 response regulator transcription factor Regulator
  KI212_RS07490 (JCM2421_14950) vraS 1554881..1555927 (-) 1047 WP_059107799.1 sensor histidine kinase Regulator
  KI212_RS07495 (JCM2421_14960) liaF 1555924..1556625 (-) 702 WP_059107798.1 cell wall-active antibiotics response protein LiaF -
  KI212_RS07500 (JCM2421_14970) - 1556643..1557029 (-) 387 WP_059107797.1 hypothetical protein -
  KI212_RS07505 (JCM2421_14980) map 1557188..1557943 (-) 756 WP_059107796.1 type I methionyl aminopeptidase -
  KI212_RS07510 (JCM2421_14990) - 1558187..1559173 (+) 987 WP_059107795.1 FUSC family protein -
  KI212_RS07515 (JCM2421_15000) - 1559247..1559966 (-) 720 WP_059107794.1 type 1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40118.53 Da        Isoelectric Point: 5.6268

>NTDB_id=86231 KI212_RS07490 WP_059107799.1 1554881..1555927(-) (vraS) [Staphylococcus auricularis strain JCM 2421]
MNHYIRTIGSMLILVYSVLITFLFIDRFFVNIIYFQGMFYTQILGIPVILFLNLIIILLCIIVGSILAYKINEQNHWLQT
QIEHAIEGETVGINDQNIELYNETIALYQTLVPLNQELHRLRMKTQNMTNESYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPTLEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVTDLQRKVPMKVAHEI
EDFEVPKGIEDHLFRITQEAISNTLRHSEGTKVTVELFNKVDYLLLRIQDDGKGFNVDEKVKQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDETDAN

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=86231 KI212_RS07490 WP_059107799.1 1554881..1555927(-) (vraS) [Staphylococcus auricularis strain JCM 2421]
ATGAACCACTATATTAGAACCATTGGCTCAATGTTGATACTCGTTTATAGTGTGTTGATCACGTTTTTGTTCATTGATCG
TTTCTTCGTTAATATTATTTATTTTCAAGGCATGTTTTACACACAAATTTTAGGGATACCTGTCATTTTATTTCTCAATT
TGATTATCATTTTGTTATGTATTATCGTCGGGTCTATCTTGGCTTATAAAATTAACGAACAAAATCATTGGTTACAAACA
CAAATTGAACATGCAATCGAAGGCGAAACGGTTGGAATTAATGATCAAAACATCGAACTTTATAATGAAACCATCGCTTT
GTACCAAACGTTGGTACCACTTAACCAAGAATTGCATCGTCTCCGCATGAAAACGCAAAATATGACCAATGAATCGTACA
ACATGAATGATGTTAAAGTGAAAAAAATCATTGAAGATGAACGTCAGCGTTTAGCAAGAGAGCTACATGATTCAGTGAGT
CAACAACTCTTTGCGGCGAGTATGATGCTCTCAGCGATTAAAGAAACGAAACTTGAACCTCCATTGGACCAACAAATTCC
AACGTTAGAAAAAATGGTTCAAGATTCACAACTAGAAATGCGTGCGCTATTATTACACTTGAGACCACTTGGATTGAAAG
ACAAATCTCTCGGCGAAGGGATTAAAGATTTGGTTACAGATTTACAGCGTAAAGTGCCGATGAAAGTCGCGCATGAAATT
GAAGATTTTGAAGTACCAAAAGGAATAGAAGACCACTTATTCCGAATTACACAAGAAGCGATTTCGAATACGTTACGCCA
TTCAGAGGGTACGAAGGTGACGGTAGAGTTATTTAATAAAGTTGACTACTTATTATTACGTATCCAAGATGATGGGAAAG
GCTTTAATGTAGATGAAAAAGTAAAACAAAGTTACGGCCTTAAAAATATGAGAGAACGTGCGTTAGAAATTGGTGCGACA
TTTCATATCGTGTCATTACCTGACTCAGGTACAAGAATTGAAGTAAAAGCGCCATTGAATAAGGAGGATGAGACGGATGC
CAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

89.017

99.425

0.885


Multiple sequence alignment