Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   Q3V63_RS07435 Genome accession   NZ_CP130545
Coordinates   1571178..1571864 (-) Length   228 a.a.
NCBI ID   WP_001802022.1    Uniprot ID   A0A7U7EYP5
Organism   Staphylococcus aureus strain SA05-SX     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1566178..1576864
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V63_RS07415 rpsT 1567092..1567343 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  Q3V63_RS07420 holA 1567388..1568362 (-) 975 WP_001282563.1 DNA polymerase III subunit delta -
  Q3V63_RS07425 comEC 1568419..1570620 (-) 2202 WP_001557362.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  Q3V63_RS07430 - 1570625..1571086 (-) 462 WP_000439693.1 ComE operon protein 2 -
  Q3V63_RS07435 comEA 1571178..1571864 (-) 687 WP_001802022.1 ComEA family DNA-binding protein Machinery gene
  Q3V63_RS07440 - 1571904..1572620 (-) 717 WP_000084830.1 class I SAM-dependent methyltransferase -
  Q3V63_RS07445 rsfS 1572623..1572976 (-) 354 WP_001088020.1 ribosome silencing factor -
  Q3V63_RS07450 yqeK 1572977..1573561 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  Q3V63_RS07455 nadD 1573551..1574120 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  Q3V63_RS07460 yhbY 1574123..1574413 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  Q3V63_RS07465 aroE 1574417..1575223 (-) 807 WP_000666757.1 shikimate dehydrogenase -
  Q3V63_RS07470 yqeH 1575237..1576337 (-) 1101 WP_001280137.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25900.65 Da        Isoelectric Point: 9.6751

>NTDB_id=860141 Q3V63_RS07435 WP_001802022.1 1571178..1571864(-) (comEA) [Staphylococcus aureus strain SA05-SX]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENNSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=860141 Q3V63_RS07435 WP_001802022.1 1571178..1571864(-) (comEA) [Staphylococcus aureus strain SA05-SX]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAATAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCGAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EYP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus N315

100

100

1
  comEA Staphylococcus aureus MW2

97.368

100

0.974