Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   Q3V66_RS07920 Genome accession   NZ_CP130543
Coordinates   1654461..1655147 (-) Length   228 a.a.
NCBI ID   WP_001825349.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA07-SX     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1649461..1660147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V66_RS07900 rpsT 1650375..1650626 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  Q3V66_RS07905 holA 1650671..1651645 (-) 975 WP_001282570.1 DNA polymerase III subunit delta -
  Q3V66_RS07910 comEC 1651702..1653903 (-) 2202 WP_001807826.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  Q3V66_RS07915 - 1653908..1654369 (-) 462 WP_000439690.1 ComE operon protein 2 -
  Q3V66_RS07920 comEA 1654461..1655147 (-) 687 WP_001825349.1 ComEA family DNA-binding protein Machinery gene
  Q3V66_RS07925 - 1655187..1655903 (-) 717 WP_000084838.1 class I SAM-dependent methyltransferase -
  Q3V66_RS07930 rsfS 1655906..1656259 (-) 354 WP_001088020.1 ribosome silencing factor -
  Q3V66_RS07935 yqeK 1656260..1656844 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  Q3V66_RS07940 nadD 1656834..1657403 (-) 570 WP_000725164.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  Q3V66_RS07945 yhbY 1657406..1657696 (-) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  Q3V66_RS07950 aroE 1657700..1658506 (-) 807 WP_000666746.1 shikimate dehydrogenase -
  Q3V66_RS07955 yqeH 1658520..1659620 (-) 1101 WP_001280151.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25783.41 Da        Isoelectric Point: 9.3305

>NTDB_id=860054 Q3V66_RS07920 WP_001825349.1 1654461..1655147(-) (comEA) [Staphylococcus aureus strain SA07-SX]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQVKDGDDSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=860054 Q3V66_RS07920 WP_001825349.1 1654461..1655147(-) (comEA) [Staphylococcus aureus strain SA07-SX]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATGATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961