Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   Q3V78_RS05110 Genome accession   NZ_CP130538
Coordinates   1015133..1016119 (+) Length   328 a.a.
NCBI ID   WP_226452084.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA11-SX     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1010133..1021119
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V78_RS05085 opp4B 1010366..1011328 (+) 963 WP_000593417.1 oligopeptide ABC transporter permease -
  Q3V78_RS05090 opp4C 1011340..1012191 (+) 852 WP_117197153.1 oligopeptide ABC transporter permease -
  Q3V78_RS05095 trpS 1012233..1013222 (-) 990 WP_000448929.1 tryptophan--tRNA ligase -
  Q3V78_RS05100 spxA 1013517..1013912 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  Q3V78_RS05105 mecA 1014293..1015012 (+) 720 WP_001217727.1 adaptor protein MecA -
  Q3V78_RS05110 coiA 1015133..1016119 (+) 987 WP_226452084.1 competence protein CoiA Machinery gene
  Q3V78_RS05115 pepF 1016167..1017975 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  Q3V78_RS05120 yjbH 1018436..1019242 (-) 807 WP_000896694.1 protease adaptor protein YjbH -
  Q3V78_RS05125 - 1019265..1019630 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  Q3V78_RS05130 - 1019734..1020327 (-) 594 WP_000224616.1 CYTH domain-containing protein -
  Q3V78_RS05135 - 1020513..1020860 (+) 348 WP_001242107.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38619.21 Da        Isoelectric Point: 9.5882

>NTDB_id=859868 Q3V78_RS05110 WP_226452084.1 1015133..1016119(+) (coiA) [Staphylococcus aureus strain SA11-SX]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMSINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTVQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALDSKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=859868 Q3V78_RS05110 WP_226452084.1 1015133..1016119(+) (coiA) [Staphylococcus aureus strain SA11-SX]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTCTATTAATCCAATCACTCGAAAACTT
CATACGTTTAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTTG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTACAG
TTAACTGTTCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGATAGCAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.341

100

0.963
  coiA Staphylococcus aureus MW2

96.341

100

0.963