Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   Q3V74_RS07575 Genome accession   NZ_CP130531
Coordinates   1594909..1595595 (-) Length   228 a.a.
NCBI ID   WP_078055782.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA16-SX     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1589909..1600595
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V74_RS07555 rpsT 1590823..1591074 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  Q3V74_RS07560 holA 1591119..1592093 (-) 975 WP_001282570.1 DNA polymerase III subunit delta -
  Q3V74_RS07565 comEC 1592150..1594351 (-) 2202 WP_000967504.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  Q3V74_RS07570 - 1594356..1594817 (-) 462 WP_000439693.1 ComE operon protein 2 -
  Q3V74_RS07575 comEA 1594909..1595595 (-) 687 WP_078055782.1 ComEA family DNA-binding protein Machinery gene
  Q3V74_RS07580 - 1595635..1596351 (-) 717 WP_000942456.1 class I SAM-dependent methyltransferase -
  Q3V74_RS07585 rsfS 1596354..1596707 (-) 354 WP_001088020.1 ribosome silencing factor -
  Q3V74_RS07590 yqeK 1596708..1597292 (-) 585 WP_001017838.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  Q3V74_RS07595 nadD 1597282..1597851 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  Q3V74_RS07600 yhbY 1597854..1598144 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  Q3V74_RS07605 aroE 1598148..1598954 (-) 807 WP_000666767.1 shikimate dehydrogenase -
  Q3V74_RS07610 yqeH 1598968..1600068 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25761.45 Da        Isoelectric Point: 9.6753

>NTDB_id=859671 Q3V74_RS07575 WP_078055782.1 1594909..1595595(-) (comEA) [Staphylococcus aureus strain SA16-SX]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=859671 Q3V74_RS07575 WP_078055782.1 1594909..1595595(-) (comEA) [Staphylococcus aureus strain SA16-SX]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCTAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTGCTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
GAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.678

99.561

0.982
  comEA Staphylococcus aureus N315

98.678

99.561

0.982