Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   WBM82_RS17075 Genome accession   NZ_CP147494
Coordinates   3199565..3200425 (-) Length   286 a.a.
NCBI ID   WP_128422373.1    Uniprot ID   Q9R9J5
Organism   Bacillus subtilis strain YT1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3194565..3205425
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WBM82_RS17040 (WBM82_17090) mrpE 3194793..3195269 (+) 477 WP_128422372.1 Na+/H+ antiporter subunit E -
  WBM82_RS17045 (WBM82_17095) mrpF 3195269..3195553 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  WBM82_RS17050 (WBM82_17100) mnhG 3195537..3195911 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  WBM82_RS17055 (WBM82_17105) yuxO 3195952..3196332 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  WBM82_RS17060 (WBM82_17110) comA 3196351..3196995 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  WBM82_RS17065 (WBM82_17115) comP 3197076..3199376 (-) 2301 WP_088300729.1 histidine kinase Regulator
  WBM82_RS17070 (WBM82_17120) comX 3199388..3199552 (-) 165 WP_015384519.1 competence pheromone ComX -
  WBM82_RS17075 (WBM82_17125) comQ 3199565..3200425 (-) 861 WP_128422373.1 polyprenyl synthetase family protein Regulator
  WBM82_RS17080 (WBM82_17130) degQ 3200610..3200750 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  WBM82_RS17085 (WBM82_17135) - 3200972..3201097 (+) 126 WP_141770195.1 hypothetical protein -
  WBM82_RS17090 (WBM82_17140) - 3201212..3201580 (+) 369 WP_014477834.1 hypothetical protein -
  WBM82_RS17095 (WBM82_17145) pdeH 3201556..3202785 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  WBM82_RS17100 (WBM82_17150) pncB 3202922..3204394 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  WBM82_RS17105 (WBM82_17155) pncA 3204410..3204961 (-) 552 WP_038828671.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 286 a.a.        Molecular weight: 32618.54 Da        Isoelectric Point: 4.8309

>NTDB_id=859573 WBM82_RS17075 WP_128422373.1 3199565..3200425(-) (comQ) [Bacillus subtilis strain YT1]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFSQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIIAQIENDYRGLYYLNNDFIQKKNTLAYLYLNKRFNAASAEILSWYENTELFLSLNSKQIK
EKLTEAGVVQYLLVMKHLSLQKLKKEIARLELQENKIKKLITGIIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=859573 WBM82_RS17075 WP_128422373.1 3199565..3200425(-) (comQ) [Bacillus subtilis strain YT1]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATGGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTTCACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACGGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCCTGTGTAATGGGAGTA
ATGCTGGCAACAGGCAAATACCATCCCATTGTAGCTTCTTATTCTTATGAACTTGGGATTATTGCACAAATCGAAAATGA
TTACCGAGGTTTATATTATCTAAATAACGATTTTATTCAGAAGAAAAACACATTGGCATACTTATACTTAAATAAACGTT
TTAATGCAGCTTCTGCAGAAATCTTGAGTTGGTATGAAAATACTGAGTTGTTCTTATCATTGAATTCCAAACAAATAAAA
GAAAAATTAACTGAGGCAGGCGTAGTGCAATATTTACTTGTAATGAAACACTTGTCATTACAAAAACTAAAGAAAGAAAT
TGCTAGATTAGAATTGCAAGAGAATAAAATAAAAAAATTAATAACAGGAATCATAAAATAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(40-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9R9J5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.423

99.301

0.451