Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   WBM82_RS09350 Genome accession   NZ_CP147494
Coordinates   1704600..1705868 (+) Length   422 a.a.
NCBI ID   WP_010886508.1    Uniprot ID   O31754
Organism   Bacillus subtilis strain YT1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1699600..1710868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WBM82_RS09325 (WBM82_09355) pyrH 1700373..1701095 (+) 723 WP_003220923.1 UMP kinase -
  WBM82_RS09330 (WBM82_09360) frr 1701097..1701654 (+) 558 WP_003231927.1 ribosome recycling factor -
  WBM82_RS09335 (WBM82_09365) uppS 1701785..1702567 (+) 783 WP_003231925.1 isoprenyl transferase -
  WBM82_RS09340 (WBM82_09370) cdsA 1702571..1703380 (+) 810 WP_072174243.1 phosphatidate cytidylyltransferase -
  WBM82_RS09345 (WBM82_09375) dxr 1703442..1704593 (+) 1152 WP_003245155.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  WBM82_RS09350 (WBM82_09380) eeP 1704600..1705868 (+) 1269 WP_010886508.1 RIP metalloprotease RseP Regulator
  WBM82_RS09355 (WBM82_09385) proS 1705901..1707595 (+) 1695 WP_003231918.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46743.53 Da        Isoelectric Point: 5.0797

>NTDB_id=859520 WBM82_RS09350 WP_010886508.1 1704600..1705868(+) (eeP) [Bacillus subtilis strain YT1]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKEDQVEKVIINQKEKYPDALVIEVETADLEHDMKITGYEQGKEDELSSFTVSETSFFIVDGEEVQIAPYN
RQFGSKPVWQRIKAIAAGPIMNFILAYVILVMLGLIQGVPSNEPMLGQLTDNGRAAEAGLKEGDYIQSINGEKMRSWTDI
VSAVKENPEKEMDVAVKRDNKTLHISVTPEAVKDENKKTIGRFGSYAPTEKGVLSAVAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIVNLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINREKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=859520 WBM82_RS09350 WP_010886508.1 1704600..1705868(+) (eeP) [Bacillus subtilis strain YT1]
ATGTTCGTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGTTTTCTTCCATGAACTGGGCCATTTATTGCT
AGCCCAAAGAGCGGGAATTCTCTGCCGTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAAAAAAATGAAA
CAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGGTTTGTTCGTATGGCCGGCGAAGATCCGGAAATGATTGAGGTGAAA
CCCGGATACACGGTCGGGCTTCTGTTTAATAAAGAAGATCAAGTTGAGAAAGTCATCATCAATCAAAAGGAAAAATATCC
GGATGCTTTAGTCATTGAAGTGGAAACAGCGGATCTAGAGCATGACATGAAGATCACTGGTTATGAACAGGGGAAAGAGG
ACGAACTTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGACGGAGAAGAAGTGCAGATTGCGCCGTATAAT
CGCCAATTTGGTTCCAAACCTGTATGGCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTATTTTAGCTTA
CGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCGTCAAATGAACCTATGCTCGGGCAGCTGACAGACAATGGAC
GGGCGGCTGAAGCAGGGCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAATGAGGTCTTGGACTGACATT
GTCTCCGCTGTAAAAGAAAACCCGGAGAAAGAAATGGACGTTGCAGTAAAAAGAGATAACAAAACGCTTCATATTTCGGT
GACTCCGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGACGTTTCGGTTCCTATGCGCCGACTGAAAAAGGCGTAC
TCTCAGCGGTTGCTTACGGCGCGACATCAACAGTTGATGTCACCAAAGCCATTTTAACCAATCTGAGCAAATTAGTAACA
GGCCAATTTAAACTCGATATGCTGTCAGGTCCTGTCGGCATATATGACATGACAGACCAAGTGGCGAAAACAGGGATCGT
GAACTTATTTCAGTTTGCGGCGTTTTTAAGCATTAACCTTGGGATTGTCAACCTGCTTCCGATTCCGGCACTTGACGGAG
GAAGACTGTTGTTTCTATTTATTGAAGCGATTCGGGGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTATTTATC
GGAGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGGCTGTTTTTGTAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-408)

PDZ domain (PDZ_6)

(212-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O31754

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.211

100

0.4
  eeP Streptococcus thermophilus LMG 18311

39.344

100

0.398