Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   Q3V62_RS13280 Genome accession   NZ_CP130522
Coordinates   2683800..2684465 (-) Length   221 a.a.
NCBI ID   WP_000697884.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA23-SX     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2678800..2689465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V62_RS13260 - 2679260..2679373 (-) 114 WP_078065157.1 hypothetical protein -
  Q3V62_RS13265 - 2680042..2682042 (-) 2001 WP_057504557.1 ABC transporter permease -
  Q3V62_RS13270 - 2682039..2682794 (-) 756 WP_000923775.1 ABC transporter ATP-binding protein -
  Q3V62_RS13275 braS 2682902..2683789 (-) 888 WP_000143422.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  Q3V62_RS13280 braR 2683800..2684465 (-) 666 WP_000697884.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  Q3V62_RS13285 - 2684491..2684691 (-) 201 WP_000604725.1 hypothetical protein -
  Q3V62_RS13290 - 2684889..2686313 (+) 1425 WP_303062337.1 alkaline phosphatase -
  Q3V62_RS13780 - 2686373..2686474 (-) 102 WP_000731972.1 SE2200 family small protein -
  Q3V62_RS13300 - 2686596..2687051 (-) 456 WP_000106183.1 MarR family winged helix-turn-helix transcriptional regulator -
  Q3V62_RS13305 - 2687296..2688057 (-) 762 WP_000323448.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25406.50 Da        Isoelectric Point: 4.7961

>NTDB_id=859386 Q3V62_RS13280 WP_000697884.1 2683800..2684465(-) (braR) [Staphylococcus aureus strain SA23-SX]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=859386 Q3V62_RS13280 WP_000697884.1 2683800..2684465(-) (braR) [Staphylococcus aureus strain SA23-SX]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAATTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991