Detailed information NTG0859313

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: WBI56_RS01635
• Genome accession: NZ_CP147492
• Coordinates: 297850..298971 (+)
• Length: 373 a.a.
• NCBI ID: WP_064672038.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MC4-2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 292850..303971

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WBI56_RS01610 (WBI56_01610)	ycdA	292859..293923 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
WBI56_RS01615 (WBI56_01615)	-	293924..294076 (-)	153	WP_021481864.1	hypothetical protein	-
WBI56_RS01620 (WBI56_01620)	ycdB	294250..295671 (+)	1422	WP_338732146.1	YcdB/YcdC domain-containing protein	-
WBI56_RS01625 (WBI56_01625)	ycdC	295855..297216 (+)	1362	WP_338732148.1	YcdB/YcdC domain-containing protein	-
WBI56_RS01630 (WBI56_01630)	cwlK	297224..297727 (-)	504	WP_124073440.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
WBI56_RS01635 (WBI56_01635)	rapF	297850..298971 (+)	1122	WP_064672038.1	response regulator aspartate phosphatase RapJ	Regulator
WBI56_RS01640 (WBI56_01640)	ycdF	299079..299855 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
WBI56_RS01645 (WBI56_01645)	ycdG	299880..301565 (+)	1686	WP_212060606.1	alpha-glucosidase	-
WBI56_RS01650 (WBI56_01650)	znuA	301753..302712 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
WBI56_RS01655 (WBI56_01655)	znuC	302767..303462 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44443.31 Da
• Isoelectric Point: 4.8344

>NTDB_id=859313 WBI56_RS01635 WP_064672038.1 297850..298971(+) (rapF) [Bacillus subtilis strain MC4-2]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSASEWEDDMYLTKFRLIHELYLGNGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=859313 WBI56_RS01635 WP_064672038.1 297850..298971(+) (rapF) [Bacillus subtilis strain MC4-2]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTATACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAAGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGTCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAACGGTGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCAGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405