Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   Q3V79_RS07915 Genome accession   NZ_CP130513
Coordinates   1641246..1641932 (-) Length   228 a.a.
NCBI ID   WP_001793467.1    Uniprot ID   A0A641AAY3
Organism   Staphylococcus aureus strain SA29-SX     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1636246..1646932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V79_RS07895 rpsT 1637160..1637411 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  Q3V79_RS07900 holA 1637456..1638430 (-) 975 WP_001282568.1 DNA polymerase III subunit delta -
  Q3V79_RS07905 comEC 1638487..1640688 (-) 2202 WP_001566670.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  Q3V79_RS07910 - 1640693..1641154 (-) 462 WP_000439693.1 ComE operon protein 2 -
  Q3V79_RS07915 comEA 1641246..1641932 (-) 687 WP_001793467.1 ComEA family DNA-binding protein Machinery gene
  Q3V79_RS07920 - 1641972..1642688 (-) 717 WP_000084829.1 class I SAM-dependent methyltransferase -
  Q3V79_RS07925 rsfS 1642691..1643044 (-) 354 WP_001088022.1 ribosome silencing factor -
  Q3V79_RS07930 yqeK 1643045..1643629 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  Q3V79_RS07935 nadD 1643619..1644188 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  Q3V79_RS07940 yhbY 1644191..1644481 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  Q3V79_RS07945 aroE 1644485..1645291 (-) 807 WP_000666748.1 shikimate dehydrogenase -
  Q3V79_RS07950 yqeH 1645305..1646405 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25786.50 Da        Isoelectric Point: 9.6753

>NTDB_id=859110 Q3V79_RS07915 WP_001793467.1 1641246..1641932(-) (comEA) [Staphylococcus aureus strain SA29-SX]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDNALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=859110 Q3V79_RS07915 WP_001793467.1 1641246..1641932(-) (comEA) [Staphylococcus aureus strain SA29-SX]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATAATG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A641AAY3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

100

100

1
  comEA Staphylococcus aureus N315

97.368

100

0.974