Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   Q3V69_RS07795 Genome accession   NZ_CP130510
Coordinates   1615047..1615733 (-) Length   228 a.a.
NCBI ID   WP_001802022.1    Uniprot ID   A0A7U7EYP5
Organism   Staphylococcus aureus strain SA31-SX     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1610047..1620733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V69_RS07775 rpsT 1610961..1611212 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  Q3V69_RS07780 holA 1611257..1612231 (-) 975 WP_001282563.1 DNA polymerase III subunit delta -
  Q3V69_RS07785 comEC 1612288..1614489 (-) 2202 WP_001557362.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  Q3V69_RS07790 - 1614494..1614955 (-) 462 WP_000439693.1 ComE operon protein 2 -
  Q3V69_RS07795 comEA 1615047..1615733 (-) 687 WP_001802022.1 ComEA family DNA-binding protein Machinery gene
  Q3V69_RS07800 - 1615773..1616489 (-) 717 WP_000084830.1 class I SAM-dependent methyltransferase -
  Q3V69_RS07805 rsfS 1616492..1616845 (-) 354 WP_001088020.1 ribosome silencing factor -
  Q3V69_RS07810 yqeK 1616846..1617430 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  Q3V69_RS07815 nadD 1617420..1617989 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  Q3V69_RS07820 yhbY 1617992..1618282 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  Q3V69_RS07825 aroE 1618286..1619092 (-) 807 WP_000666757.1 shikimate dehydrogenase -
  Q3V69_RS07830 yqeH 1619106..1620206 (-) 1101 WP_303080517.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25900.65 Da        Isoelectric Point: 9.6751

>NTDB_id=859021 Q3V69_RS07795 WP_001802022.1 1615047..1615733(-) (comEA) [Staphylococcus aureus strain SA31-SX]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENNSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=859021 Q3V69_RS07795 WP_001802022.1 1615047..1615733(-) (comEA) [Staphylococcus aureus strain SA31-SX]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAATAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCGAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EYP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus N315

100

100

1
  comEA Staphylococcus aureus MW2

97.368

100

0.974