Detailed information NTG0085897

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QUE57_RS15940
• Genome accession: NZ_AP027436
• Coordinates: 2935719..2936744 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC571 isolate EC571
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2930719..2941744

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE57_RS15920 (MUTS10_30450)	metJ	2931904..2932221 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QUE57_RS15925 (MUTS10_30460)	yiiX	2932281..2932889 (+)	609	WP_048969931.1	YiiX family permuted papain-like enzyme	-
QUE57_RS15930 (MUTS10_30470)	rpmE	2932950..2933162 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QUE57_RS15935 (MUTS10_30480)	priA	2933365..2935563 (+)	2199	WP_063085506.1	primosomal protein N'	Machinery gene
QUE57_RS15940 (MUTS10_30490)	cytR	2935719..2936744 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QUE57_RS15945 (MUTS10_30500)	ftsN	2936836..2937795 (+)	960	WP_000068828.1	cell division protein FtsN	-
QUE57_RS15950 (MUTS10_30510)	hslV	2937888..2938418 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QUE57_RS15955 (MUTS10_30520)	hslU	2938428..2939759 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
QUE57_RS15960 (MUTS10_30530)	menA	2939826..2940752 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QUE57_RS15965 (MUTS10_30540)	rraA	2940845..2941330 (+)	486	WP_001545067.1	ribonuclease E activity regulator RraA	-
QUE57_RS15970 (MUTS10_30550)	zapB	2941415..2941660 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=85897 QUE57_RS15940 WP_000644904.1 2935719..2936744(+) (cytR) [Escherichia coli strain EC571 isolate EC571]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=85897 QUE57_RS15940 WP_000644904.1 2935719..2936744(+) (cytR) [Escherichia coli strain EC571 isolate EC571]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTTTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCTCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628