Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   Q3V81_RS07475 Genome accession   NZ_CP130505
Coordinates   1577697..1578383 (-) Length   228 a.a.
NCBI ID   WP_001802022.1    Uniprot ID   A0A7U7EYP5
Organism   Staphylococcus aureus strain SA35-SX     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1572697..1583383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V81_RS07455 rpsT 1573610..1573861 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  Q3V81_RS07460 holA 1573906..1574880 (-) 975 WP_001282563.1 DNA polymerase III subunit delta -
  Q3V81_RS07465 - 1574937..1577139 (-) 2203 Protein_1466 DNA internalization-related competence protein ComEC/Rec2 -
  Q3V81_RS07470 - 1577144..1577605 (-) 462 WP_000439693.1 ComE operon protein 2 -
  Q3V81_RS07475 comEA 1577697..1578383 (-) 687 WP_001802022.1 ComEA family DNA-binding protein Machinery gene
  Q3V81_RS07480 - 1578423..1579139 (-) 717 WP_000084830.1 class I SAM-dependent methyltransferase -
  Q3V81_RS07485 rsfS 1579142..1579495 (-) 354 WP_001088020.1 ribosome silencing factor -
  Q3V81_RS07490 yqeK 1579496..1580080 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  Q3V81_RS07495 nadD 1580070..1580639 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  Q3V81_RS07500 yhbY 1580642..1580932 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  Q3V81_RS07505 aroE 1580936..1581742 (-) 807 WP_000666757.1 shikimate dehydrogenase -
  Q3V81_RS07510 yqeH 1581756..1582856 (-) 1101 WP_001280137.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25900.65 Da        Isoelectric Point: 9.6751

>NTDB_id=858848 Q3V81_RS07475 WP_001802022.1 1577697..1578383(-) (comEA) [Staphylococcus aureus strain SA35-SX]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENNSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=858848 Q3V81_RS07475 WP_001802022.1 1577697..1578383(-) (comEA) [Staphylococcus aureus strain SA35-SX]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAATAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCGAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EYP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus N315

100

100

1
  comEA Staphylococcus aureus MW2

97.368

100

0.974