Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   Q3V81_RS04395 Genome accession   NZ_CP130505
Coordinates   920532..921518 (+) Length   328 a.a.
NCBI ID   WP_000959282.1    Uniprot ID   A0A7U7EXT8
Organism   Staphylococcus aureus strain SA35-SX     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 915532..926518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V81_RS04370 opp4B 915746..916708 (+) 963 WP_000915997.1 oligopeptide ABC transporter permease -
  Q3V81_RS04375 opp4C 916720..917601 (+) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  Q3V81_RS04380 trpS 917643..918632 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  Q3V81_RS04385 spxA 918926..919321 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  Q3V81_RS04390 mecA 919692..920411 (+) 720 WP_001217728.1 adaptor protein MecA -
  Q3V81_RS04395 coiA 920532..921518 (+) 987 WP_000959282.1 competence protein CoiA Machinery gene
  Q3V81_RS04400 pepF 921566..923374 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  Q3V81_RS04405 yjbH 923834..924640 (-) 807 WP_303050127.1 protease adaptor protein YjbH -
  Q3V81_RS04410 - 924663..925028 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  Q3V81_RS04415 - 925132..925725 (-) 594 WP_000224619.1 CYTH domain-containing protein -
  Q3V81_RS04420 - 925911..926258 (+) 348 WP_001242103.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38878.55 Da        Isoelectric Point: 9.5714

>NTDB_id=858834 Q3V81_RS04395 WP_000959282.1 920532..921518(+) (coiA) [Staphylococcus aureus strain SA35-SX]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=858834 Q3V81_RS04395 WP_000959282.1 920532..921518(+) (coiA) [Staphylococcus aureus strain SA35-SX]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EXT8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

100

100

1
  coiA Staphylococcus aureus MW2

97.561

100

0.976