Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   Q3V71_RS07665 Genome accession   NZ_CP130501
Coordinates   1617911..1618597 (-) Length   228 a.a.
NCBI ID   WP_078055782.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA38-SX     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1612911..1623597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V71_RS07645 rpsT 1613825..1614076 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  Q3V71_RS07650 holA 1614121..1615095 (-) 975 WP_001282570.1 DNA polymerase III subunit delta -
  Q3V71_RS07655 comEC 1615152..1617353 (-) 2202 WP_000967504.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  Q3V71_RS07660 - 1617358..1617819 (-) 462 WP_000439693.1 ComE operon protein 2 -
  Q3V71_RS07665 comEA 1617911..1618597 (-) 687 WP_078055782.1 ComEA family DNA-binding protein Machinery gene
  Q3V71_RS07670 - 1618637..1619353 (-) 717 WP_000942456.1 class I SAM-dependent methyltransferase -
  Q3V71_RS07675 rsfS 1619356..1619709 (-) 354 WP_001088020.1 ribosome silencing factor -
  Q3V71_RS07680 yqeK 1619710..1620294 (-) 585 WP_001017838.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  Q3V71_RS07685 nadD 1620284..1620853 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  Q3V71_RS07690 yhbY 1620856..1621146 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  Q3V71_RS07695 aroE 1621150..1621956 (-) 807 WP_000666767.1 shikimate dehydrogenase -
  Q3V71_RS07700 yqeH 1621970..1623070 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25761.45 Da        Isoelectric Point: 9.6753

>NTDB_id=858718 Q3V71_RS07665 WP_078055782.1 1617911..1618597(-) (comEA) [Staphylococcus aureus strain SA38-SX]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=858718 Q3V71_RS07665 WP_078055782.1 1617911..1618597(-) (comEA) [Staphylococcus aureus strain SA38-SX]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCTAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTGCTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
GAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.678

99.561

0.982
  comEA Staphylococcus aureus N315

98.678

99.561

0.982