Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   Q2T90_RS02545 Genome accession   NZ_CP130489
Coordinates   498874..499920 (-) Length   348 a.a.
NCBI ID   WP_107506124.1    Uniprot ID   A0A2T4KGV3
Organism   Staphylococcus devriesei strain GYZ2     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 493874..504920
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q2T90_RS02515 (Q2T90_02515) - 494404..495651 (-) 1248 WP_107506345.1 aminopeptidase -
  Q2T90_RS02520 (Q2T90_02520) - 495664..495870 (-) 207 WP_103166672.1 DUF1128 domain-containing protein -
  Q2T90_RS02525 (Q2T90_02525) - 496013..496477 (+) 465 WP_103166671.1 low molecular weight protein-tyrosine-phosphatase -
  Q2T90_RS02530 (Q2T90_02530) - 496483..496767 (+) 285 WP_103166670.1 YtxH domain-containing protein -
  Q2T90_RS02535 (Q2T90_02535) - 496866..498092 (+) 1227 WP_103166669.1 YihY/virulence factor BrkB family protein -
  Q2T90_RS02540 (Q2T90_02540) vraR 498255..498884 (-) 630 WP_103166668.1 response regulator transcription factor Regulator
  Q2T90_RS02545 (Q2T90_02545) vraS 498874..499920 (-) 1047 WP_107506124.1 sensor histidine kinase Regulator
  Q2T90_RS02550 (Q2T90_02550) liaF 499917..500618 (-) 702 WP_103166666.1 cell wall-active antibiotics response protein LiaF -
  Q2T90_RS02555 (Q2T90_02555) - 500647..500961 (-) 315 WP_241956780.1 hypothetical protein -
  Q2T90_RS02560 (Q2T90_02560) map 501221..501973 (-) 753 WP_107506122.1 type I methionyl aminopeptidase -
  Q2T90_RS02565 (Q2T90_02565) - 502122..503111 (+) 990 WP_107506121.1 aromatic acid exporter family protein -
  Q2T90_RS02570 (Q2T90_02570) - 503175..503897 (-) 723 WP_103166662.1 type 1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40139.54 Da        Isoelectric Point: 6.1841

>NTDB_id=858586 Q2T90_RS02545 WP_107506124.1 498874..499920(-) (vraS) [Staphylococcus devriesei strain GYZ2]
MNHYLRAIGSMLILVYSMFTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSILAYKINQQNHWIKS
QIEHAIEGETVGINDQNIELYNETVDLYQTLVPLNQELHRLRIKTQNLTNENYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPVLEKMVQESQLEMRALLLHLRPLGLKDKTLGEGIKDLVIDLQKKVPMKVIHDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGSKVTVELFNQQDYLLLRIQDNGKGFNVDEKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDDSYGD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=858586 Q2T90_RS02545 WP_107506124.1 498874..499920(-) (vraS) [Staphylococcus devriesei strain GYZ2]
ATGAATCACTACTTAAGAGCTATAGGTTCCATGCTTATACTCGTGTATAGCATGTTTACTGCGTTCTTATTTATAGATAA
AGTATTTGTAAATATTATCTATTTTCAAGGGATGTTTTATACGCAAATATTTGGCATACCTGTCTTCTTGTTTTTAAATT
TAGTAATTATTTTATTATGTATTATTGTAGGTTCGATATTAGCCTACAAGATTAATCAACAAAATCATTGGATTAAATCA
CAAATTGAACATGCAATCGAAGGGGAAACTGTAGGTATTAATGATCAAAATATTGAATTATACAATGAGACAGTAGATCT
TTATCAAACATTAGTACCCTTAAATCAAGAATTACATCGTTTGAGAATTAAAACTCAAAATTTAACTAATGAAAATTATA
ATATGAATGATGTTAAAGTTAAAAAAATAATTGAAGATGAGCGTCAACGTTTAGCTCGCGAATTACATGATTCAGTAAGT
CAACAACTTTTCGCAGCAAGCATGATGTTATCAGCAATTAAAGAAACTAAATTAGAACCACCACTCGACCAACAAATACC
TGTGCTTGAAAAAATGGTTCAAGAATCTCAACTAGAAATGCGTGCATTATTATTACATTTACGCCCACTAGGACTAAAAG
ATAAAACGCTTGGTGAAGGTATTAAAGATTTAGTTATCGATTTACAGAAAAAGGTTCCTATGAAAGTTATACATGATATT
CAAGACTTTAAAGTACCTAAAGGGATTGAAGATCATTTGTTTAGAATTACTCAAGAAGCAATATCTAATACATTGAGACA
TTCTAATGGTTCAAAGGTTACGGTAGAGTTATTTAACCAACAAGATTATTTGTTATTAAGAATACAAGATAATGGTAAAG
GATTTAATGTTGATGAAAAAGTTGAACAAAGTTATGGTTTAAAAAATATGAGAGAACGTGCATTAGAGATTGGGGCTACG
TTCCACATTGTGTCATTACCTGATTCAGGAACGCGTATAGAAGTAAAAGCACCATTAAATAAGGAGGATGATTCATATGG
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2T4KGV3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

91.667

100

0.917