Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   STYK_RS08930 Genome accession   NZ_AP024523
Coordinates   1789567..1791336 (-) Length   589 a.a.
NCBI ID   WP_261804921.1    Uniprot ID   -
Organism   Streptococcus toyakuensis strain TP1632     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1784567..1796336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STYK_RS08900 (STYK_17090) - 1785163..1785528 (-) 366 WP_000216437.1 Asp23/Gls24 family envelope stress response protein -
  STYK_RS08905 (STYK_17100) rpmB 1785684..1785872 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  STYK_RS08910 (STYK_17110) - 1785979..1786653 (-) 675 WP_261089778.1 LiaF transmembrane domain-containing protein -
  STYK_RS08915 (STYK_17120) - 1786658..1787104 (-) 447 WP_070528641.1 LytTR family DNA-binding domain-containing protein -
  STYK_RS08920 (STYK_17130) - 1787218..1787721 (-) 504 WP_261804919.1 phosphatase PAP2 family protein -
  STYK_RS08925 (STYK_17140) rcrQ 1787817..1789577 (-) 1761 WP_261804920.1 ABC transporter ATP-binding protein Regulator
  STYK_RS08930 (STYK_17150) rcrP 1789567..1791336 (-) 1770 WP_261804921.1 ABC transporter ATP-binding protein Regulator
  STYK_RS08935 (STYK_17160) - 1791311..1791781 (-) 471 WP_261804922.1 MarR family winged helix-turn-helix transcriptional regulator -
  STYK_RS08940 (STYK_17170) - 1791995..1792640 (+) 646 Protein_1712 DUF4190 domain-containing protein -
  STYK_RS08945 (STYK_17180) - 1792690..1793406 (-) 717 WP_000532882.1 YebC/PmpR family DNA-binding transcriptional regulator -
  STYK_RS08950 (STYK_17190) - 1793503..1794873 (-) 1371 WP_261804923.1 MATE family efflux transporter -
  STYK_RS08955 (STYK_17200) recA 1794975..1796141 (-) 1167 WP_238095613.1 recombinase RecA Machinery gene

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65339.73 Da        Isoelectric Point: 6.5216

>NTDB_id=85766 STYK_RS08930 WP_261804921.1 1789567..1791336(-) (rcrP) [Streptococcus toyakuensis strain TP1632]
MKKLAKRISRKEWGMILLAILFTCFSVYLELEVPTYISKITDLLGSQGTNLDELWQPASMMVGMSFLAFLSAVAVGFFAS
RVAASYTSRLRSDIFNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQVLITMGLQVVTRGPIMAIWAIGKILGHSEYWLWA
VLVAVIVNVLMTTVLMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEEYQNEKFAAANDELTRLNLFVNRLMAI
LNPIMMGISSGLSVAIYWIGAYVINDAAPSARLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTMVSAKRINQVLDLH
SSIQNPVHVQLADENLKGQVEFKDVTFRYAANSEAVIEHVSFKADAGQTVAFIGSTGSGKSTLVNLIPRFYDVSAGQILV
DGVNVQDYALEDLRNKVGYIPQKAVLFSGDVKGNLDFGQSQETPLSEQAMWQALELAQSKNFIEDKESGLESEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLANNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=85766 STYK_RS08930 WP_261804921.1 1789567..1791336(-) (rcrP) [Streptococcus toyakuensis strain TP1632]
ATGAAGAAATTAGCAAAACGAATTAGTAGAAAAGAATGGGGGATGATTTTACTTGCCATTCTCTTTACTTGCTTTTCGGT
CTATCTGGAGTTGGAAGTGCCGACCTATATCTCTAAAATCACGGATTTGCTAGGTAGTCAAGGAACTAATTTAGATGAGT
TGTGGCAGCCGGCAAGCATGATGGTGGGAATGTCCTTTCTGGCTTTCTTGTCCGCAGTTGCAGTTGGATTTTTTGCCTCC
AGAGTGGCTGCTTCTTATACTAGTAGGCTGAGAAGTGATATTTTTAACAGAGTTTTAGACTACTCGCAGACAGAGATTAA
GAAATTCTCTATTCCCAGTCTCCTAACTCGTACCACCAATGACATTACTCAGGTTCAGGTGTTGATTACCATGGGCTTGC
AAGTGGTGACGCGTGGTCCGATTATGGCTATCTGGGCTATCGGGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCC
GTACTTGTGGCAGTGATTGTCAACGTTCTGATGACGACTGTTTTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCA
GGGGCTGACTGATAAACTGAACAGTATCACTCGTGAGAGTTTAACAGGTATTCGTGTCGTTCGCGCCTACAATGCTGAAG
AATACCAAAATGAAAAATTTGCAGCAGCAAATGATGAATTGACACGCTTGAATTTGTTTGTCAACCGTCTTATGGCTATT
TTGAACCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTGGCGATTTATTGGATTGGAGCCTATGTAATCAACGATGC
TGCTCCATCAGCGCGTCTGCCTCTCTTTAGTGACATGGTTGTTTTCATGTCTTATGCCATGCAGGTTGTCATGGGCTTCC
TTCTCATGGGAGCACTCTTCATCGTTCTTCCCCGAACCATGGTTTCTGCTAAGCGGATCAATCAGGTTTTAGATTTGCAT
TCTTCTATCCAAAATCCTGTTCACGTGCAGCTGGCTGATGAAAACCTCAAAGGTCAGGTCGAATTTAAGGATGTGACCTT
CCGCTATGCGGCAAATTCGGAGGCGGTTATTGAGCATGTCAGCTTTAAAGCAGACGCTGGTCAAACAGTAGCCTTTATTG
GGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTGATTCCACGTTTCTACGATGTATCAGCAGGGCAAATTCTGGTG
GACGGTGTCAATGTTCAAGACTATGCCTTAGAAGATTTGCGCAACAAGGTTGGTTATATTCCTCAGAAAGCAGTTCTCTT
TTCAGGTGATGTCAAGGGTAATCTAGACTTTGGACAGAGTCAAGAAACACCGCTTAGTGAGCAGGCTATGTGGCAGGCTC
TGGAATTGGCCCAGTCTAAGAACTTTATCGAAGACAAGGAATCTGGCTTAGAGTCAGAAGTGGCCCAAGGAGGAACCAAC
TTCTCAGGTGGTCAAAGACAGCGTCTGGCAATTGCGCGTGCCTTGGCTCGGAAGCCAGAAATCCTCATCTTTGATGACTC
CTTCTCAGCCTTGGACTACAAGACAGACCGTGTTCTACGCCAAGAGCTAGCAGAAAAAACTAAATCTATGACCAAGCTTA
TCGTTGCACAGCGTATTTCAACCATTATGGATGCAGATTTGATTTTGGTCTTGGATCAAGGGAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTAGCTAATAACGAAGTGTACCAAGAAATTGCCTATTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

66.722

100

0.681

Multiple sequence alignment