Detailed information NTG0085760

Bioinformatically predicted

Overview

• Name: covR
• Type: Regulator
• Locus tag: STYK_RS08520
• Genome accession: NZ_AP024523
• Coordinates: 1690219..1690908 (-)
• Length: 229 a.a.
• NCBI ID: WP_173274385.1
• Uniprot ID: -
• Organism: Streptococcus toyakuensis strain TP1632
• Function: repress comR expression (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	1688768..1690173	1690219..1690908	flank	46

Gene organization within MGE regions

Location: 1688768..1690908

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STYK_RS08515	-	1688825..1690173 (+)	1349	WP_261804648.1	IS3 family transposase	-
STYK_RS08520 (STYK_16350)	covR	1690219..1690908 (-)	690	WP_173274385.1	response regulator transcription factor	Regulator

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 26789.90 Da
• Isoelectric Point: 7.5085

>NTDB_id=85760 STYK_RS08520 WP_173274385.1 1690219..1690908(-) (covR) [Streptococcus toyakuensis strain TP1632]
MGKRILLLEKERNLAHFLSLELQKEQYRVDQVEEGQKALSMALQTDYDLILLNAHLGDMTAQDFADKLSRTKPASVIMVL
DHREELQDHIETIQRFAVSYIYKPVLIENLVARISAIFRGRDFIDQHCSQMKVPTSYRNLRMDVEHHTVYRGEEMIALTR
REYDLLATLMGSKKVLTREQLLESVWKYESATETNIVDVYIRYLRSKLDVKGQKSYIKTVRGVGYTMQE

Nucleotide

• Length: 690 bp

>NTDB_id=85760 STYK_RS08520 WP_173274385.1 1690219..1690908(-) (covR) [Streptococcus toyakuensis strain TP1632]
ATGGGGAAACGGATTTTATTACTTGAGAAAGAACGAAATCTAGCTCACTTTTTAAGTTTGGAACTCCAAAAAGAGCAATA
CCGAGTTGATCAGGTTGAGGAGGGGCAAAAAGCCCTCTCCATGGCTCTTCAAACAGACTATGACTTGATTTTATTGAATG
CTCATCTGGGGGATATGACGGCCCAGGATTTTGCAGACAAGCTGAGTCGGACTAAGCCAGCTTCAGTCATCATGGTCTTG
GATCATCGCGAAGAATTGCAAGACCATATTGAGACAATCCAACGCTTTGCTGTTTCTTACATCTATAAGCCAGTCCTTAT
TGAGAATCTGGTAGCTCGTATTTCAGCGATTTTCCGAGGTCGGGACTTTATAGATCAACACTGTAGTCAGATGAAGGTTC
CAACGTCTTATCGCAATCTGCGTATGGATGTAGAGCATCATACCGTTTATCGTGGCGAGGAGATGATTGCTCTGACGCGC
CGTGAGTATGACCTTTTGGCTACTCTTATGGGAAGCAAGAAAGTTCTGACTCGTGAGCAGTTGTTGGAAAGTGTCTGGAA
GTATGAAAGTGCGACCGAAACCAATATCGTGGATGTCTATATCCGTTATCTACGTAGCAAGCTTGATGTAAAAGGTCAGA
AAAGCTACATTAAAACCGTTCGTGGTGTTGGTTACACCATGCAAGAATAG

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (154-226)

• Response regulator receiver domain (Response_reg) (5-114)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
covR	Streptococcus salivarius strain HSISS4	49.13	100	0.493
covR	Lactococcus lactis subsp. lactis strain DGCC12653	46.93	99.563	0.467