Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   STYK_RS01850 Genome accession   NZ_AP024523
Coordinates   357295..358026 (+) Length   243 a.a.
NCBI ID   WP_261100319.1    Uniprot ID   -
Organism   Streptococcus toyakuensis strain TP1632     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 352295..363026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STYK_RS01825 (STYK_03270) - 353749..354381 (+) 633 WP_150922872.1 DJ-1/PfpI family protein -
  STYK_RS01830 (STYK_03280) dnaJ 354580..355716 (+) 1137 WP_261037822.1 molecular chaperone DnaJ -
  STYK_RS01835 (STYK_03290) - 355795..356448 (-) 654 WP_084887540.1 hypothetical protein -
  STYK_RS01840 (STYK_03300) - 356526..356807 (-) 282 WP_261805129.1 hypothetical protein -
  STYK_RS01845 (STYK_03310) - 356817..357227 (-) 411 WP_261056507.1 HIT family protein -
  STYK_RS01850 (STYK_03320) pptA 357295..358026 (+) 732 WP_261100319.1 ABC transporter ATP-binding protein Regulator
  STYK_RS01855 (STYK_03330) - 358023..359072 (+) 1050 WP_125447817.1 ABC transporter permease -
  STYK_RS01860 (STYK_03340) - 359135..359464 (-) 330 WP_261805130.1 helicase BlpT -
  STYK_RS01865 (STYK_03350) - 359740..360078 (+) 339 WP_000682133.1 LytTR family DNA-binding domain-containing protein -
  STYK_RS01870 (STYK_03360) comE/blpR 360083..360820 (+) 738 WP_261805131.1 response regulator transcription factor Regulator
  STYK_RS01875 (STYK_03370) - 360834..362174 (+) 1341 WP_001099893.1 sensor histidine kinase -
  STYK_RS01880 (STYK_03380) blpC 362218..362373 (-) 156 WP_000358811.1 quorum-sensing system pheromone BlpC -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27156.66 Da        Isoelectric Point: 4.7044

>NTDB_id=85729 STYK_RS01850 WP_261100319.1 357295..358026(+) (pptA) [Streptococcus toyakuensis strain TP1632]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGSININGLTLQEDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYSIEQKVAFERVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAIADLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFIILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=85729 STYK_RS01850 WP_261100319.1 357295..358026(+) (pptA) [Streptococcus toyakuensis strain TP1632]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTCCCTGTCTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCGACGACTATTAATGAGATTATCGGTCTGTTGACACCTT
ATAGCGGTTCTATCAATATCAATGGACTTACTCTTCAAGAAGATGCAACGAGCTACCGTAAGCAAATTGGCTACATTCCT
GAGACACCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCACATCGAAACGGTTGCTATGGCTTATAGTATTGAGCAAAA
GGTAGCTTTTGAGCGAGTAGAACCTTTGCTAAAAATGTTCCGTCTGGATCAGAAATTAGATTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCGAGTCTCTTCATCGTGGATGAGCCTTTC
CTTGGGCTCGATCCGCTGGCTATTGCAGACTTGATTCAGCTTTTGGAAGTGGAAAAGCAAAAGGGCAAGTCCATTCTCAT
GAGTACCCACGTGCTGGATTCAGCGGAGAAGATGTGTGATGCCTTTATCATTCTTCACAAGGGAGAGGTGCGTGCCAAGG
GGAATCTCCTGCAACTGCGCGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

71.784

99.177

0.712
  pptA Streptococcus thermophilus LMD-9

70.954

99.177

0.704

Multiple sequence alignment