Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   STYK_RS01585 Genome accession   NZ_AP024523
Coordinates   302355..303392 (+) Length   345 a.a.
NCBI ID   WP_000727281.1    Uniprot ID   F9HAB0
Organism   Streptococcus toyakuensis strain TP1632     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 297355..308392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STYK_RS01550 (STYK_02730) yidC 297391..298317 (-) 927 WP_020903084.1 membrane protein insertase YidC -
  STYK_RS01555 (STYK_02740) - 298395..298673 (-) 279 WP_020903085.1 acylphosphatase -
  STYK_RS01560 (STYK_02750) - 298707..299447 (+) 741 WP_261805112.1 TrmH family RNA methyltransferase -
  STYK_RS01565 (STYK_02760) - 299502..300185 (+) 684 WP_261805113.1 Bax inhibitor-1 family protein -
  STYK_RS01570 (STYK_02770) asnA 300297..301289 (+) 993 WP_173274827.1 aspartate--ammonia ligase -
  STYK_RS01575 (STYK_02780) rsmD 301354..301893 (+) 540 WP_000706959.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  STYK_RS01580 (STYK_02790) coaD 301883..302371 (+) 489 WP_261805114.1 pantetheine-phosphate adenylyltransferase -
  STYK_RS01585 (STYK_02800) sepM 302355..303392 (+) 1038 WP_000727281.1 SepM family pheromone-processing serine protease Regulator
  STYK_RS01590 - 303450..303680 (+) 231 WP_063612229.1 DUF1146 family protein -
  STYK_RS01595 (STYK_02810) murA 303704..304987 (+) 1284 WP_261805115.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  STYK_RS01600 (STYK_02820) - 304980..305168 (+) 189 WP_033684807.1 DNA-directed RNA polymerase subunit beta -
  STYK_RS01605 (STYK_02830) endA 305207..306031 (+) 825 WP_261038737.1 DNA-entry nuclease EndA Machinery gene
  STYK_RS01610 (STYK_02840) - 306186..307517 (+) 1332 WP_261805116.1 hemolysin family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37553.57 Da        Isoelectric Point: 4.8665

>NTDB_id=85721 STYK_RS01585 WP_000727281.1 302355..303392(+) (sepM) [Streptococcus toyakuensis strain TP1632]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVNSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASAREGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=85721 STYK_RS01585 WP_000727281.1 302355..303392(+) (sepM) [Streptococcus toyakuensis strain TP1632]
ATGAAAAAAAAGATTAGATGGCCCTTATATGTCATTGCGGCCTTAATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
CTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTCAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTCCAGCACGCTACTTTAGCCCATATGATTTATGCTTGGTTGACGCCTTTTACA
GATATTCGTAGTGCCCAAGAGACTACAGGTGGCTCTTCTGATGTTGAATTTATGCGGATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCTAAGTATCAAGGGCTAAAAACAGCTGGTAAGGATATTGAACTAAAATATCTTGGGGTTTATGTTT
TGACTGTGACGGATAATTCGACCTTTAAAGGGATTCTCAACATCTCTGATACGGTCACAGCAGTCAATGATCAAACCTTT
GACAGTTCCAAAGACTTGATTGATTACGTCAATTCTCAAAAACTAGGGGACTCCGTCAAGGTGACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGTAAGATTATCACCTTGGAAAATGGCAAAAATGGGATTGGAATCGGTTTGATTGACCGTA
CGGAAGTGACCAGTGATGTCCCAATTCGCTTTTCAACAGCTGGTATTGGTGGCCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCGGACCCTGGCCTTCGTAATGGCCGCATTGTTGCCGGTACCGGAACTATTGACCGTGATGG
TAATGTGGGGGATATTGGAGGTATTGATAAGAAAGTTGTAGCTTCGGCTAGAGAAGGTGCTGCTATTTTCTTTGCCCCTG
ATAACCCTGTTAGTGAAGAAGAACAAAAAGCGCATCCGGATGCGAAAAACAACTACCAAACAGCCCTAGAAGCAGCCAAA
ACAATCAAGACTGATATGAAAATCGTGCCAGTTAAAACCCTACAAGATGCAATTGATTACTTGAAAAACAATCCCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F9HAB0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment