Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   QZH48_RS11565 Genome accession   NZ_CP129879
Coordinates   2353251..2354537 (-) Length   428 a.a.
NCBI ID   WP_021721862.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis strain CAB701     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2348251..2359537
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QZH48_RS11550 (QZH48_11550) - 2349442..2349978 (-) 537 WP_021721865.1 hypothetical protein -
  QZH48_RS11555 (QZH48_11555) - 2349984..2351315 (-) 1332 WP_021721864.1 FAD/NAD(P)-binding oxidoreductase -
  QZH48_RS11560 (QZH48_11560) - 2351331..2353181 (-) 1851 WP_029344534.1 proline--tRNA ligase -
  QZH48_RS11565 (QZH48_11565) eeP 2353251..2354537 (-) 1287 WP_021721862.1 RIP metalloprotease RseP Regulator
  QZH48_RS11570 (QZH48_11570) - 2354556..2355359 (-) 804 WP_301675734.1 phosphatidate cytidylyltransferase -
  QZH48_RS11575 (QZH48_11575) - 2355359..2356093 (-) 735 WP_003130589.1 isoprenyl transferase -
  QZH48_RS11580 (QZH48_11580) yajC 2356465..2356797 (-) 333 WP_021721860.1 preprotein translocase subunit YajC -
  QZH48_RS11585 (QZH48_11585) - 2356892..2357590 (-) 699 WP_146978282.1 DNA alkylation repair protein -
  QZH48_RS11590 (QZH48_11590) rlmH 2357609..2358088 (-) 480 WP_058205116.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46499.09 Da        Isoelectric Point: 6.7740

>NTDB_id=856146 QZH48_RS11565 WP_021721862.1 2353251..2354537(-) (eeP) [Lactococcus lactis subsp. lactis strain CAB701]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSKILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVINPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSASVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=856146 QZH48_RS11565 WP_021721862.1 2353251..2354537(-) (eeP) [Lactococcus lactis subsp. lactis strain CAB701]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAAAAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCGCTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAATAAATCCAGAAGCTGAAAATTCTGTTAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACGGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCAGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATTGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGCTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGTCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCGACTGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGACAAACTTGGTGGCCCAGTTGCTATTTATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGACGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTCCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
CAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.845

100

0.572

  eeP Streptococcus thermophilus LMD-9

56.613

100

0.57