Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   QZH48_RS09280 Genome accession   NZ_CP129879
Coordinates   1945083..1945784 (-) Length   233 a.a.
NCBI ID   WP_301675653.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis strain CAB701     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1940083..1950784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QZH48_RS09260 (QZH48_09260) - 1940192..1941409 (-) 1218 WP_146978217.1 cysteine desulfurase -
  QZH48_RS09265 (QZH48_09265) sufD 1941409..1942665 (-) 1257 WP_269889464.1 Fe-S cluster assembly protein SufD -
  QZH48_RS09270 (QZH48_09270) sufC 1942803..1943573 (-) 771 WP_038601853.1 Fe-S cluster assembly ATPase SufC -
  QZH48_RS09275 (QZH48_09275) - 1943749..1945080 (-) 1332 WP_058205200.1 glycosyltransferase family 4 protein -
  QZH48_RS09280 (QZH48_09280) mecA 1945083..1945784 (-) 702 WP_301675653.1 adaptor protein MecA Regulator
  QZH48_RS09285 (QZH48_09285) - 1945914..1946648 (-) 735 WP_038601859.1 amino acid ABC transporter ATP-binding protein -
  QZH48_RS09290 (QZH48_09290) - 1946648..1947334 (-) 687 WP_004255158.1 amino acid ABC transporter permease -
  QZH48_RS09295 (QZH48_09295) - 1947482..1948390 (-) 909 WP_301675654.1 diacylglycerol kinase family protein -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 27034.43 Da        Isoelectric Point: 4.0890

>NTDB_id=856131 QZH48_RS09280 WP_301675653.1 1945083..1945784(-) (mecA) [Lactococcus lactis subsp. lactis strain CAB701]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSLEFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=856131 QZH48_RS09280 WP_301675653.1 1945083..1945784(-) (mecA) [Lactococcus lactis subsp. lactis strain CAB701]
ATGAAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGACATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATGTGGGAATGTTAACTTTCCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAAGCGATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTTGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCTAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATTGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.142

100

0.991
  mecA Lactococcus lactis subsp. cremoris KW2

96.567

100

0.966