Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   Q0F97_RS03460 Genome accession   NZ_CP129878
Coordinates   710152..711417 (+) Length   421 a.a.
NCBI ID   WP_103083442.1    Uniprot ID   -
Organism   Tetragenococcus halophilus strain H2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 705152..716417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q0F97_RS03435 (Q0F97_03425) tsf 705589..706470 (+) 882 WP_014125335.1 translation elongation factor Ts -
  Q0F97_RS03440 (Q0F97_03430) pyrH 706685..707404 (+) 720 WP_041591846.1 UMP kinase -
  Q0F97_RS03445 (Q0F97_03435) frr 707408..707965 (+) 558 WP_014125333.1 ribosome recycling factor -
  Q0F97_RS03450 (Q0F97_03440) - 708397..709197 (+) 801 WP_014125332.1 isoprenyl transferase -
  Q0F97_RS03455 (Q0F97_03445) - 709194..710000 (+) 807 WP_014125331.1 phosphatidate cytidylyltransferase -
  Q0F97_RS03460 (Q0F97_03450) eeP 710152..711417 (+) 1266 WP_103083442.1 RIP metalloprotease RseP Regulator
  Q0F97_RS03465 (Q0F97_03455) - 711502..713208 (+) 1707 WP_103100219.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 421 a.a.        Molecular weight: 46153.87 Da        Isoelectric Point: 4.1110

>NTDB_id=856081 Q0F97_RS03460 WP_103083442.1 710152..711417(+) (eeP) [Tetragenococcus halophilus strain H2]
MKTLITFLIVFSVVVVIHEFGHFYFAKKSGILVREFSIGMGPKLFSHQAKDGTTYTIRAIPMGGYVRMAGYEDEEELKAG
MPVSLEVNENNEVIKINTSSKVQLENAIPLEVTRYDLTEALEITGFVNGNEDNVASYSVNHEAMIIEEDGTQLRIAPSDV
QFQSAKLWQRMLTNFAGPMNNFLLTIVLFIAIVFLQGGVPNEDSTVLGEVDSEGVAATAGLRSGDEIVAIDQEEVSSWPE
LQQTIQQQPDEELSLEVNRDDQTFSVDATPESVESGNQDIGQLGVQASLKTGFWDKVVGGVKESWDMLVQILAALRNLVT
NFSLDQLGGPVAIFQMSDQAAQQGAMTVLLLTAMISVNLGIVNLLPIPGLDGGKLLLNIVEAIRGKPISEEKEGMITLVG
FGLLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=856081 Q0F97_RS03460 WP_103083442.1 710152..711417(+) (eeP) [Tetragenococcus halophilus strain H2]
ATGAAGACATTGATTACATTTTTAATCGTCTTTTCAGTAGTTGTGGTAATACATGAATTTGGACATTTTTATTTTGCTAA
GAAATCGGGCATTTTAGTCCGTGAATTTTCTATCGGCATGGGTCCTAAGCTATTCAGCCACCAAGCTAAAGACGGTACGA
CTTATACCATACGAGCCATACCGATGGGTGGTTATGTTCGGATGGCAGGCTATGAGGATGAAGAAGAACTAAAAGCTGGA
ATGCCGGTATCTTTGGAAGTAAATGAGAATAACGAAGTCATTAAAATCAATACAAGTTCAAAAGTACAGTTAGAAAATGC
GATCCCTTTAGAAGTGACTCGTTATGATTTGACTGAGGCGCTTGAAATTACAGGATTTGTTAATGGAAATGAAGATAATG
TAGCAAGCTATTCAGTAAATCATGAGGCAATGATTATTGAAGAAGACGGTACACAGCTGCGTATTGCACCTAGTGATGTA
CAGTTTCAGTCTGCTAAGTTATGGCAAAGAATGTTGACAAATTTCGCGGGACCTATGAATAATTTCTTATTAACGATTGT
GTTATTCATTGCCATTGTATTTTTACAAGGTGGAGTTCCTAATGAAGACTCAACAGTACTTGGTGAAGTAGATTCTGAAG
GTGTAGCAGCAACAGCCGGTTTAAGGTCGGGGGATGAAATTGTAGCGATCGACCAAGAAGAAGTATCAAGTTGGCCTGAA
CTGCAACAAACGATTCAACAACAACCTGATGAAGAGTTATCGCTTGAAGTTAACCGGGATGACCAAACTTTTTCTGTAGA
TGCAACGCCTGAAAGCGTAGAATCGGGTAATCAAGATATTGGGCAATTGGGCGTACAAGCATCGCTTAAAACTGGTTTTT
GGGACAAAGTAGTAGGCGGTGTGAAAGAAAGTTGGGACATGCTTGTCCAAATTTTAGCTGCCTTAAGAAACTTGGTAACT
AATTTTAGTTTGGATCAATTAGGCGGTCCAGTTGCTATTTTCCAAATGTCTGATCAAGCTGCTCAACAAGGCGCTATGAC
TGTCTTACTTTTGACCGCTATGATATCAGTCAATTTAGGTATCGTGAACTTACTACCCATTCCTGGTTTGGACGGTGGAA
AATTACTACTTAATATAGTCGAAGCTATACGTGGAAAACCAATTAGTGAAGAAAAAGAAGGGATGATTACCTTAGTAGGT
TTTGGTTTGTTGATGTTATTAATGGTATTAGTCACTTGGAATGATATCCAGCGCTTTTTCTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-407)

PDZ domain (PDZ_6)

(209-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

51.168

100

0.52
  eeP Streptococcus thermophilus LMD-9

51.168

100

0.52