Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   QZN14_RS03640 Genome accession   NZ_CP129875
Coordinates   675557..676906 (+) Length   449 a.a.
NCBI ID   WP_001065465.1    Uniprot ID   -
Organism   Streptococcus agalactiae COH1     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 670557..681906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QZN14_RS03610 - 670962..671528 (+) 567 WP_000592389.1 PepSY domain-containing protein -
  QZN14_RS03615 - 671577..672227 (-) 651 WP_000100034.1 amino acid ABC transporter permease -
  QZN14_RS03620 - 672239..672934 (-) 696 WP_000173638.1 amino acid ABC transporter permease -
  QZN14_RS03625 - 672947..673747 (-) 801 WP_000946173.1 transporter substrate-binding domain-containing protein -
  QZN14_RS03630 - 673759..674514 (-) 756 WP_000053146.1 amino acid ABC transporter ATP-binding protein -
  QZN14_RS03635 vicR 674854..675564 (+) 711 WP_000722052.1 response regulator YycF Regulator
  QZN14_RS03640 vicK 675557..676906 (+) 1350 WP_001065465.1 cell wall metabolism sensor histidine kinase VicK Regulator
  QZN14_RS03645 vicX 676910..677719 (+) 810 WP_001289498.1 MBL fold metallo-hydrolase Regulator
  QZN14_RS03650 - 677722..678090 (+) 369 WP_000719384.1 YbaN family protein -
  QZN14_RS03655 rnc 678265..678951 (+) 687 WP_000661526.1 ribonuclease III -

Sequence


Protein


Download         Length: 449 a.a.        Molecular weight: 51060.11 Da        Isoelectric Point: 4.8106

>NTDB_id=855990 QZN14_RS03640 WP_001065465.1 675557..676906(+) (vicK) [Streptococcus agalactiae COH1]
MNNSAANIRSFELALLFLLVFVAVYFVYLAVRDFKMSKDIRLLNWKVRDLIAGNYSDSILIQGDADLVELGESLNDLSDV
FRMAHDNLEQEKNRLASILTYMTDGVLATDRSGKIVMINETAQQQFNLAYDEALSMNIVDMLGSGSPYSFQDLVSKTPEV
VLNRRDENGEFVTLRIRFALNRRESGFISGLVAVSHDATEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALNE
EVAPSFIKVSLDETNRMMRMISDLLSLSRIDNEVTHLDVEMTNFTAFMTSILNRFDQIRNQKTVTGKVYEIVRDYPLKSI
WVEIDTDKMTQVIDNILNNAVKYSPDGGKITVNLRTTKTQMILSISDQGLGIPKKDLPLIFDRFYRVDKARSRQQGGTGL
GLSIAKEIVKQHKGFIWAKSEYGKGSTFTIVLPYDKDAVTYEEWEDVED

Nucleotide


Download         Length: 1350 bp        

>NTDB_id=855990 QZN14_RS03640 WP_001065465.1 675557..676906(+) (vicK) [Streptococcus agalactiae COH1]
ATGAATAATAGTGCTGCAAATATTAGGTCGTTTGAGCTAGCCTTACTTTTTTTACTAGTTTTTGTTGCTGTCTATTTTGT
TTATCTAGCGGTTAGAGATTTTAAAATGTCTAAAGATATCCGGCTTTTGAATTGGAAAGTCAGAGATTTGATAGCAGGAA
ATTATTCAGATAGTATTCTAATTCAAGGTGATGCAGATTTGGTAGAATTAGGGGAAAGTCTAAATGATTTATCTGATGTC
TTCCGAATGGCACATGATAACTTAGAACAAGAAAAGAATCGCTTAGCGAGTATCTTAACTTATATGACTGACGGTGTGCT
GGCTACAGATCGTTCAGGAAAAATCGTTATGATTAATGAGACAGCCCAACAGCAGTTCAATCTAGCATATGATGAAGCTT
TATCAATGAATATTGTTGATATGTTAGGGTCGGGAAGTCCATATTCGTTCCAAGATTTAGTCTCTAAGACGCCAGAGGTA
GTTCTTAATAGACGTGATGAAAATGGTGAATTTGTTACCTTACGGATTCGATTTGCTTTGAACCGTCGTGAAAGTGGTTT
TATTTCCGGTTTAGTTGCAGTATCACACGATGCTACTGAGCAAGAGAAAGAAGAGCGTGAAAGAAGACTTTTTGTATCTA
ATGTTTCTCATGAACTTCGTACACCTTTGACATCTGTAAAATCTTATTTAGAAGCTTTAGATGAGGGAGCGCTCAATGAA
GAAGTTGCTCCAAGCTTCATTAAGGTATCTCTAGATGAAACAAATCGTATGATGCGTATGATATCAGATTTATTAAGTTT
ATCGCGCATTGATAATGAAGTAACGCATTTAGATGTTGAAATGACGAATTTTACAGCTTTCATGACCTCAATTTTGAATC
GATTTGATCAGATTAGAAATCAAAAAACAGTCACAGGAAAAGTTTATGAAATTGTCAGAGATTATCCTCTTAAGTCAATT
TGGGTGGAAATTGATACAGATAAGATGACTCAAGTGATTGATAACATTTTAAATAATGCAGTCAAGTATTCACCAGATGG
TGGTAAGATTACAGTTAATCTACGCACAACTAAAACGCAGATGATTTTATCAATATCAGACCAAGGCTTAGGTATTCCCA
AAAAAGATTTACCTCTCATTTTTGATCGTTTTTATCGTGTTGATAAGGCGAGAAGTCGTCAACAGGGTGGGACTGGACTT
GGTTTGTCAATTGCAAAAGAAATTGTTAAGCAGCATAAGGGATTTATTTGGGCTAAGAGTGAGTATGGTAAAGGGTCTAC
TTTTACAATCGTCTTGCCTTATGATAAAGATGCTGTAACTTATGAAGAATGGGAGGACGTTGAAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

74.576

91.982

0.686

  micB Streptococcus pneumoniae Cp1015

67.765

94.655

0.641