Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | KJS82_RS13795 | Genome accession | NZ_AP024511 |
| Coordinates | 2785363..2785758 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus isolate 2007-13 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2780363..2790758
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJS82_RS13765 (RVB3_25930) | - | 2781621..2782025 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| KJS82_RS13770 | - | 2782363..2782455 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| KJS82_RS13775 (RVB3_25940) | - | 2782587..2782820 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| KJS82_RS13780 (RVB3_25950) | murA | 2782931..2784196 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| KJS82_RS13785 (RVB3_25960) | fabZ | 2784230..2784670 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| KJS82_RS13790 (RVB3_25970) | - | 2784729..2785169 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| KJS82_RS13795 (RVB3_25980) | ssb | 2785363..2785758 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| KJS82_RS13800 (RVB3_25990) | sceD | 2786147..2786842 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| KJS82_RS13805 (RVB3_26000) | tenA | 2787229..2787918 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| KJS82_RS13810 (RVB3_26010) | thiD | 2787911..2788741 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| KJS82_RS13815 (RVB3_26020) | thiM | 2788725..2789516 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| KJS82_RS13820 (RVB3_26030) | thiE | 2789518..2790159 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=85592 KJS82_RS13795 WP_000932694.1 2785363..2785758(+) (ssb) [Staphylococcus aureus isolate 2007-13]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=85592 KJS82_RS13795 WP_000932694.1 2785363..2785758(+) (ssb) [Staphylococcus aureus isolate 2007-13]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |