Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   V1460_RS34070 Genome accession   NZ_CP146101
Coordinates   7579518..7580651 (+) Length   377 a.a.
NCBI ID   WP_338677437.1    Uniprot ID   -
Organism   Streptomyces sp. SCSIO 30461     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 7574518..7585651
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1460_RS34055 (V1460_34055) - 7574924..7575751 (+) 828 WP_338678330.1 hypothetical protein -
  V1460_RS34060 (V1460_34060) - 7575940..7577811 (-) 1872 WP_338678332.1 BACON domain-containing protein -
  V1460_RS34065 (V1460_34065) radA/sms 7578064..7579473 (+) 1410 WP_338677436.1 DNA repair protein RadA Machinery gene
  V1460_RS34070 (V1460_34070) disA 7579518..7580651 (+) 1134 WP_338677437.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  V1460_RS34075 (V1460_34075) - 7580739..7581542 (-) 804 WP_338677438.1 hypothetical protein -
  V1460_RS34080 (V1460_34080) - 7581850..7582776 (+) 927 WP_338677440.1 A/G-specific adenine glycosylase -
  V1460_RS34085 (V1460_34085) - 7582993..7583625 (+) 633 WP_338677442.1 SigE family RNA polymerase sigma factor -
  V1460_RS34090 (V1460_34090) - 7583613..7584338 (+) 726 WP_338677443.1 hypothetical protein -
  V1460_RS34095 (V1460_34095) cseB 7584427..7585131 (+) 705 WP_338677445.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 40611.44 Da        Isoelectric Point: 5.0294

>NTDB_id=854677 V1460_RS34070 WP_338677437.1 7579518..7580651(+) (disA) [Streptomyces sp. SCSIO 30461]
MAANDRGSAPGKSGGGSGGSGKEWLMRASLSAVAPGTALRDGLERILRGNTGGLLVLGMDKSVESMCTGGFVLDVEFTAT
RLRELCKLDGALILDKDITKIHRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEE
SAAILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDE
LIAGVEPERELVIRDYVPEPTAKRSRTVDEALAELNDLTHPELLELPTVARALGYSGSPETLDSAVSPRGYRLLAKVPRL
PGAIIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=854677 V1460_RS34070 WP_338677437.1 7579518..7580651(+) (disA) [Streptomyces sp. SCSIO 30461]
GTGGCAGCCAACGACCGGGGCTCGGCCCCCGGAAAGTCCGGCGGAGGCTCCGGGGGGTCCGGCAAGGAGTGGCTGATGCG
CGCCTCTCTGAGTGCGGTCGCTCCGGGCACCGCCCTGCGCGACGGACTGGAGCGCATCCTGCGGGGTAACACCGGTGGGC
TGCTGGTCCTCGGTATGGACAAGTCGGTCGAATCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACG
CGGCTGCGTGAGCTGTGCAAGCTCGACGGGGCCCTGATCCTCGACAAGGACATCACCAAGATCCACCGGGCCGGTGTGCA
GTTGGTCCCCGACGCCTCCATCCCCACGGAGGAGACGGGCACCCGGCACCGGACCGCCGACCGGGTCTCCAAGCAGTGCG
GTTTCCCCGTGGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCTCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAG
TCGGCCGCGATCCTGTCCCGGGCGAACCAGGCACTGGCGACCCTTGAGCGCTACAAACTGCGTCTTGACGAAGTCGCCGG
GACGCTGTCCGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGATGTCACGGCGGTCGCACAGCGACTGGAGATGGTGC
GCCGGATCGCCACGGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGACGTCTGCTCGCCCTTCAGCTCGACGAG
CTGATCGCGGGCGTGGAACCGGAGCGCGAGCTGGTCATCCGCGACTATGTCCCGGAGCCGACGGCGAAGCGGTCGCGCAC
GGTGGACGAGGCCCTGGCCGAGCTGAACGACCTGACGCATCCCGAGCTGCTCGAACTGCCCACCGTGGCACGGGCGCTGG
GCTACAGCGGATCACCTGAGACCCTGGACTCCGCGGTCTCGCCGCGGGGTTACCGTCTGCTGGCGAAGGTGCCGCGGCTG
CCCGGCGCGATCATCGAGCGCCTGGTCGAGCATTTCGGGGGACTCCAGAAGCTGCTGGCCGCGAGCGTGGACGACCTCCA
GGCGGTCGACGGTGTCGGCGAGGCCAGAGCGCGCAGCGTCAGGGAGGGGCTGTCCCGACTGGCGGAGTCCTCGATCCTGG
AGCGCTACGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.938

94.695

0.435