Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   QYS54_RS11660 Genome accession   NZ_CP129633
Coordinates   2171564..2172514 (+) Length   316 a.a.
NCBI ID   WP_028414467.1    Uniprot ID   A0AAX6BLZ5
Organism   Priestia aryabhattai strain S2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2166564..2177514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYS54_RS11630 (QYS54_11630) lepB 2166739..2167299 (+) 561 WP_098112348.1 signal peptidase I -
  QYS54_RS11635 (QYS54_11635) - 2167535..2168098 (+) 564 WP_301862526.1 NAD(P)H-dependent oxidoreductase -
  QYS54_RS11640 (QYS54_11640) - 2168655..2168840 (+) 186 WP_014459286.1 hypothetical protein -
  QYS54_RS11645 (QYS54_11645) - 2169331..2169495 (+) 165 WP_013057894.1 hypothetical protein -
  QYS54_RS11650 (QYS54_11650) - 2169577..2169831 (-) 255 WP_013057893.1 hypothetical protein -
  QYS54_RS11655 (QYS54_11655) - 2170194..2171000 (+) 807 WP_013057892.1 cell wall hydrolase -
  QYS54_RS11660 (QYS54_11660) ceuB 2171564..2172514 (+) 951 WP_028414467.1 ABC transporter permease Machinery gene
  QYS54_RS11665 (QYS54_11665) - 2172507..2173454 (+) 948 WP_034267834.1 iron chelate uptake ABC transporter family permease subunit -
  QYS54_RS11670 (QYS54_11670) - 2173448..2174206 (+) 759 WP_028414465.1 ABC transporter ATP-binding protein -
  QYS54_RS11675 (QYS54_11675) - 2174230..2175186 (+) 957 WP_033580631.1 siderophore ABC transporter substrate-binding protein -
  QYS54_RS11680 (QYS54_11680) - 2175229..2175495 (+) 267 Protein_2234 manganese catalase family protein -
  QYS54_RS11685 (QYS54_11685) - 2175750..2175890 (+) 141 WP_014459290.1 hypothetical protein -
  QYS54_RS11690 (QYS54_11690) - 2176359..2177438 (-) 1080 WP_301862537.1 PrsW family intramembrane metalloprotease -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34953.16 Da        Isoelectric Point: 9.9188

>NTDB_id=854676 QYS54_RS11660 WP_028414467.1 2171564..2172514(+) (ceuB) [Priestia aryabhattai strain S2]
MKFYQLILVFAVLAVSSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTAVLGAVFVLACDILGRVIIFPYEVSIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=854676 QYS54_RS11660 WP_028414467.1 2171564..2172514(+) (ceuB) [Priestia aryabhattai strain S2]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCGGTTTCGTCTCTTTTTGTAGGAGTACAAGACCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGGTTAATTATGCAGCAAATTACGCGAAATAAGTTTGTCTCTCCAACAACTGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTTGGTTTAATGCTCGGCAGTATCGTAAGTTCCCTAGCTACCTTCATCGCTTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGCGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATCCCCAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGGTGCTTGGAGCTGTATTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAGTTTCTATTG
GGTTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.333

94.937

0.497