Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   V2W30_RS22090 Genome accession   NZ_CP146022
Coordinates   4715472..4716593 (-) Length   373 a.a.
NCBI ID   WP_338699005.1    Uniprot ID   A0ACD5AFC0
Organism   Streptomyces sp. Q6     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4710472..4721593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V2W30_RS22070 (V2W30_22070) - 4710839..4712647 (+) 1809 WP_338698997.1 histidine kinase -
  V2W30_RS22075 (V2W30_22075) - 4712635..4713315 (+) 681 WP_338698999.1 response regulator transcription factor -
  V2W30_RS22080 (V2W30_22080) - 4713359..4714021 (-) 663 WP_338699001.1 phosphatase PAP2 family protein -
  V2W30_RS22085 (V2W30_22085) - 4714210..4715031 (+) 822 WP_338699003.1 hypothetical protein -
  V2W30_RS22090 (V2W30_22090) disA 4715472..4716593 (-) 1122 WP_338699005.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  V2W30_RS22095 (V2W30_22095) radA/sms 4716685..4718094 (-) 1410 WP_338699007.1 DNA repair protein RadA Machinery gene
  V2W30_RS22100 (V2W30_22100) - 4718319..4720030 (+) 1712 Protein_4354 hypothetical protein -
  V2W30_RS22105 (V2W30_22105) - 4720043..4720906 (-) 864 WP_338699009.1 hypothetical protein -

Sequence

Protein


Download         Length: 373 a.a.        Molecular weight: 40056.81 Da        Isoelectric Point: 5.0961

>NTDB_id=854582 V2W30_RS22090 WP_338699005.1 4715472..4716593(-) (disA) [Streptomyces sp. Q6]
MAANDRAAAPGKSGGSSADGLMRAALSAVAPGTGLRDGLERILRGNTGGLIVLGSDKTVESMCTGGFILDVEFTATRLRE
LCKLDGGIVVSSNLDKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVNYPVVSVSQSMRLIALYVDGQRRVLEDSAAI
LSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIAG
VEPERELVVRDYVPEPTAKRSRTVDEALAELNSLHHGELLELPIVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGAI
IDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=854582 V2W30_RS22090 WP_338699005.1 4715472..4716593(-) (disA) [Streptomyces sp. Q6]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGCGGTTCCAGTGCGGACGGCCTCATGCGCGCCGCGCTGAG
CGCGGTGGCGCCCGGCACGGGCCTGCGGGACGGTCTGGAGCGCATCCTCCGCGGCAACACGGGCGGGCTCATCGTCCTCG
GCTCCGACAAGACGGTCGAGTCGATGTGTACCGGCGGCTTCATCCTCGACGTCGAGTTCACGGCGACGCGCCTGCGCGAG
CTGTGCAAGCTGGACGGCGGCATCGTCGTCTCCTCGAACCTCGACAAGATCCTGCGGGCCGGCGTGCAGCTGGTGCCGGA
CCCGACGATCCCCACCGAGGAGACGGGCACGCGGCACCGCACGGCGGACCGCGTCAGCAAGCAGGTCAACTACCCGGTCG
TCTCCGTGTCCCAGTCGATGCGGCTGATCGCCCTCTACGTGGACGGGCAGCGCCGCGTCCTGGAGGACTCGGCGGCGATC
CTCTCCCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTCCGTCTCGACGAGGTCGCGGGCACGCTCTCCGC
CCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCACAGCGGTCGCGCAGCGTCTGGAGATGGTGCGCCGCATCGCCA
CCGAGATCGCCGAGTACGTCGTCGAGTTGGGTACGGACGGGCGCCTGCTGGCCCTCCAGCTGGACGAGTTGATCGCGGGC
GTCGAGCCCGAGCGCGAGCTCGTCGTACGGGACTATGTGCCCGAGCCGACGGCCAAGCGCTCGCGCACGGTCGACGAGGC
GCTGGCCGAGCTGAACTCGCTGCATCACGGTGAGCTGCTCGAACTGCCCATCGTGGCGCGGGCGTTGGGGTACACGGGCT
CGCCGGAGGCGCTGGACTCGGCGGTGTCGCCGCGCGGCTTCCGCCTCCTGGCGAAGGTTCCTCGGCTGCCGGGCGCCATC
ATCGACCGTCTCGTGGAGCACTTCGGCGGCTTGCAGAAGCTGCTCGCGGCGAGCGTCGACGACCTCCAGACGGTGGACGG
GGTGGGCGAGGCGCGGGCCCGCAGCGTGCGCGAGGGCCTGTCACGGCTCGCGGAGTCGTCGATCCTGGAGCGGTACGTCT
AG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(154-296)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(37-150)

Helix-hairpin-helix motif (HHH_2)

(323-358)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.714

93.834

0.429