Detailed information NTG0085443

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: BVAD3_RS12525
• Genome accession: NZ_AP024501
• Coordinates: 2602776..2605127 (-)
• Length: 783 a.a.
• NCBI ID: WP_163094353.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain AD-3
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2597776..2610127

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVAD3_RS12490 (BVAD3_24850)	-	2598142..2598480 (-)	339	WP_007408270.1	YqxA family protein	-
BVAD3_RS12495 (BVAD3_24860)	-	2598497..2599690 (-)	1194	WP_007612673.1	stage II sporulation protein P	-
BVAD3_RS12500 (BVAD3_24870)	gpr	2599758..2600864 (-)	1107	WP_014418417.1	GPR endopeptidase	-
BVAD3_RS12505 (BVAD3_24880)	rpsT	2601067..2601333 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
BVAD3_RS12510 (BVAD3_24890)	holA	2601350..2602391 (-)	1042	Protein_2441	DNA polymerase III subunit delta	-
BVAD3_RS12515	-	2602431..2602582 (-)	152	Protein_2442	hypothetical protein	-
BVAD3_RS12520 (BVAD3_24900)	-	2602623..2602757 (+)	135	WP_003152870.1	YqzM family protein	-
BVAD3_RS12525 (BVAD3_24910)	comEC	2602776..2605127 (-)	2352	WP_163094353.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
BVAD3_RS12530 (BVAD3_24920)	-	2605128..2605697 (-)	570	WP_003152868.1	ComE operon protein 2	-
BVAD3_RS12535 (BVAD3_24930)	comEA	2605764..2606378 (-)	615	WP_014418419.1	helix-hairpin-helix domain-containing protein	Machinery gene
BVAD3_RS12540 (BVAD3_24940)	comER	2606437..2607258 (+)	822	WP_014418420.1	late competence protein ComER	-
BVAD3_RS12545 (BVAD3_24950)	-	2607327..2608064 (-)	738	WP_014418421.1	class I SAM-dependent methyltransferase	-
BVAD3_RS12550 (BVAD3_24960)	rsfS	2608061..2608417 (-)	357	WP_007408260.1	ribosome silencing factor	-
BVAD3_RS12555 (BVAD3_24970)	yqeK	2608435..2608995 (-)	561	WP_014418422.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
BVAD3_RS12560 (BVAD3_24980)	-	2608985..2609554 (-)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
BVAD3_RS12565 (BVAD3_24990)	yhbY	2609565..2609855 (-)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 86768.59 Da
• Isoelectric Point: 8.9073

>NTDB_id=85443 BVAD3_RS12525 WP_163094353.1 2602776..2605127(-) (comEC) [Bacillus velezensis strain AD-3]
MKYKYLLLPLAAVSATAGIAAAHVFWVLLLFLLYLLFIIVKTKQHAPVIVCLVSFCLYFFLYTVCDAANVTRYQAGSYTE
QAVITNIPKVDGAKMSAVIRTHDKEKWTASYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPAHATVPGGFDYKEYLYSQQI
HWLFSVTSIQQCEKSKQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGILLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLVKRGIHSSAALSLSYLLLLLFNP
YFLWQAGFQLSFAVSASLILSSSILKKAGKSRLAGLAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTVFVIPV
SVIGFLLLLLSRQMGECLFDMFDLVMKPVHDFITYAASVDLFTMIVSKPDFVSLLLLAVSVFTLFAALEKGGFLKLRKTA
LFFCAVLAYLICHPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVISYTGESWKEKRHPYSIGEKVLIPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKNHRVKRLIVPVGFVKEPKDQTILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESSDGRSKNDSSLVLWTVLSGVSWLLTGDLESDGETEVLKTYPNLRADILKAGHHGSKSSTSEAFLKQLQPEAALISAGK
ENRYHHPHEEVLDRLKAYSVNVLRTDISGTIQYRFKKGAGTFSVFPPYDIEEIRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=85443 BVAD3_RS12525 WP_163094353.1 2602776..2605127(-) (comEC) [Bacillus velezensis strain AD-3]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACTGCGGGAATTGCCGCCGCTCATGTCTTCTGGGT
TCTGCTCCTTTTTCTTCTGTATCTTCTCTTTATTATTGTAAAAACAAAGCAGCATGCTCCGGTTATTGTCTGCCTCGTTT
CTTTTTGTCTTTATTTCTTTCTTTATACGGTTTGTGACGCCGCGAATGTAACGCGGTATCAGGCCGGCAGTTATACTGAA
CAGGCCGTCATCACTAACATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACACATGACAAGGAAAAATG
GACGGCTTCGTACAAAATCCGGTCTCTTGAGGAAAAGAGACTCATTGAACAGCTTGAACCGGGGATGCGCTGCACGTTTA
CAGGTTCTCTGGAGCAGCCTGCACATGCGACGGTTCCCGGAGGTTTTGATTATAAGGAATATCTTTACTCTCAGCAGATT
CACTGGTTATTTTCCGTGACTTCCATTCAGCAGTGTGAAAAATCCAAACAGCCGCTGTTTAAACTGCTGAACATCAGAAA
AAATTTGATTTCGATCATTCGGAATCACGTGCCTGAATCTTCCGCCGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGATATACTGAGTGCATATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCGGGATTATTTTATGCTCTGATCAGAATCGGGCTGACAAGAGAAAAAGCGGGAATTTTGCTGCTGTT
GTTTTTGCCGGTGTATACGCTGCTGAGCGGTGCCGCCCCATCCGTATTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTGTTAAACGCGGCATTCATTCCTCCGCTGCATTGTCCCTGTCTTATCTGCTGCTCCTGCTGTTTAATCCT
TACTTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCTCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCGGGGAAAAGCAGACTTGCCGGGCTTGCGATGGCTTCATTCATTGCGGAGCTCAGCTCACTTCCGTTTCTTCTCTATC
ATTTTCAGCAAATTTCACTTGTCAGTTTTCCGATGAATATGGTGATGGTGCCATTTTATACGGTATTTGTCATTCCGGTT
TCTGTCATCGGTTTCCTTCTTCTTTTACTTTCAAGGCAGATGGGAGAATGTTTGTTTGATATGTTCGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTACTATGATTGTGTCAAAGCCTGACTTTGTTTCCC
TTCTGCTGCTTGCGGTTTCCGTTTTTACGCTTTTTGCGGCTTTGGAAAAGGGAGGTTTTTTAAAACTCAGGAAAACGGCT
CTTTTTTTCTGCGCGGTTTTGGCTTATTTAATATGCCATCCGTATTTCAGTCCATGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCACTGTTTATAAGCGCGCCGCACCGCAAAGGGACCGTAATGGTTGATACAGGGGGAGTGATTTCTT
ATACTGGAGAATCATGGAAAGAAAAACGCCACCCGTATTCTATCGGCGAGAAGGTTTTGATTCCGTTTTTAAACGGAAAA
GGGGTGAAAAAGCTGGATGCACTGATTTTAACCCATGCGGATCAAGATCACATCGGAGAAGCCGGAGTGTTAATCAAAAA
TCATAGAGTCAAACGGTTAATTGTCCCCGTGGGATTCGTAAAAGAACCGAAAGATCAGACCATATTAAATATGGCGAAAG
AAAACAACATTCCCGTTGCCGAAGCAAAGCGGGGCGACACCATTACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGTCTGACGGAAGGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAAGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACGGAAGTGCTGAAAACGTATCCGAATCTGAGGGCTGATATATTGAAGGCGGGTC
ATCACGGCAGCAAAAGCTCAACGAGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAAGCGGCGCTGATTTCAGCAGGAAAA
GAGAATCGATACCATCATCCGCATGAAGAAGTGCTGGATCGTTTGAAGGCGTACTCTGTCAATGTGCTTCGCACCGATAT
CAGCGGAACGATTCAATACAGATTTAAAAAAGGCGCCGGAACGTTTTCCGTCTTCCCTCCATATGATATAGAAGAAATCA
GGGCGCAAGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Domain of unknown function (DUF4131) (DUF4131) (25-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	57.18	98.723	0.564