Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   QYT31_RS02630 Genome accession   NZ_CP129558
Coordinates   544186..544872 (-) Length   228 a.a.
NCBI ID   WP_416471198.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 670M     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 539186..549872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYT31_RS02610 (QYT31_02600) rpsT 540100..540351 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  QYT31_RS02615 (QYT31_02605) holA 540396..541370 (-) 975 WP_001282570.1 DNA polymerase III subunit delta -
  QYT31_RS02620 (QYT31_02610) comEC 541427..543628 (-) 2202 WP_025175028.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  QYT31_RS02625 (QYT31_02615) - 543633..544094 (-) 462 WP_000439693.1 ComE operon protein 2 -
  QYT31_RS02630 (QYT31_02620) comEA 544186..544872 (-) 687 WP_416471198.1 helix-hairpin-helix domain-containing protein Machinery gene
  QYT31_RS02635 (QYT31_02625) - 544912..545628 (-) 717 WP_000084829.1 class I SAM-dependent DNA methyltransferase -
  QYT31_RS02640 (QYT31_02630) rsfS 545631..545984 (-) 354 WP_001088020.1 ribosome silencing factor -
  QYT31_RS02645 (QYT31_02635) yqeK 545985..546569 (-) 585 WP_001019320.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  QYT31_RS02650 (QYT31_02640) nadD 546559..547128 (-) 570 WP_000725162.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  QYT31_RS02655 (QYT31_02645) yhbY 547131..547421 (-) 291 WP_000955231.1 ribosome assembly RNA-binding protein YhbY -
  QYT31_RS02660 (QYT31_02650) aroE 547425..548231 (-) 807 WP_000666748.1 shikimate dehydrogenase -
  QYT31_RS02665 (QYT31_02655) yqeH 548245..549345 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25773.50 Da        Isoelectric Point: 9.6753

>NTDB_id=854377 QYT31_RS02630 WP_416471198.1 544186..544872(-) (comEA) [Staphylococcus aureus strain 670M]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFLPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=854377 QYT31_RS02630 WP_416471198.1 544186..544872(-) (comEA) [Staphylococcus aureus strain 670M]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCCTACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

99.123

100

0.991
  comEA Staphylococcus aureus N315

97.368

100

0.974