Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   QYT32_RS01565 Genome accession   NZ_CP129553
Coordinates   291685..292371 (+) Length   228 a.a.
NCBI ID   WP_001794049.1    Uniprot ID   A0A0E1X4U4
Organism   Staphylococcus aureus strain 704D     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 286685..297371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYT32_RS01530 (QYT32_01525) yqeH 287212..288312 (+) 1101 WP_001280132.1 ribosome biogenesis GTPase YqeH -
  QYT32_RS01535 (QYT32_01530) aroE 288326..289132 (+) 807 WP_000666750.1 shikimate dehydrogenase -
  QYT32_RS01540 (QYT32_01535) yhbY 289136..289426 (+) 291 WP_000955232.1 ribosome assembly RNA-binding protein YhbY -
  QYT32_RS01545 (QYT32_01540) - 289429..289998 (+) 570 WP_123089979.1 nicotinate-nucleotide adenylyltransferase -
  QYT32_RS01550 (QYT32_01545) yqeK 289988..290572 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  QYT32_RS01555 (QYT32_01550) rsfS 290573..290926 (+) 354 WP_001088020.1 ribosome silencing factor -
  QYT32_RS01560 (QYT32_01555) - 290929..291645 (+) 717 WP_000084835.1 class I SAM-dependent DNA methyltransferase -
  QYT32_RS01565 (QYT32_01560) comEA 291685..292371 (+) 687 WP_001794049.1 ComEA family DNA-binding protein Machinery gene
  QYT32_RS01570 (QYT32_01565) - 292463..292924 (+) 462 WP_000439692.1 ComE operon protein 2 -
  QYT32_RS01575 (QYT32_01570) - 292929..295131 (+) 2203 Protein_275 DNA internalization-related competence protein ComEC/Rec2 -
  QYT32_RS01580 (QYT32_01575) holA 295188..296162 (+) 975 WP_001282570.1 DNA polymerase III subunit delta -
  QYT32_RS01585 (QYT32_01580) rpsT 296207..296458 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25766.38 Da        Isoelectric Point: 9.3383

>NTDB_id=854210 QYT32_RS01565 WP_001794049.1 291685..292371(+) (comEA) [Staphylococcus aureus strain 704D]
MVLLYQFLLRYKDFLAQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTVLKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLNSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=854210 QYT32_RS01565 WP_001794049.1 291685..292371(+) (comEA) [Staphylococcus aureus strain 704D]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAGCTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
TTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAATTCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E1X4U4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

95.595

99.561

0.952
  comEA Staphylococcus aureus N315

95.595

99.561

0.952