Detailed information NTG0853975

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: QYM01_RS01550
• Genome accession: NZ_CP129527
• Coordinates: 296921..297967 (+)
• Length: 348 a.a.
• NCBI ID: WP_012678544.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain BJ-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 291921..302967

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYM01_RS01535 (QYM01_01535)	-	293126..294784 (+)	1659	WP_206158965.1	peptide ABC transporter substrate-binding protein	-
QYM01_RS01540 (QYM01_01540)	-	294953..295867 (+)	915	WP_115250569.1	ABC transporter permease	-
QYM01_RS01545 (QYM01_01545)	-	295877..296908 (+)	1032	WP_012678545.1	ABC transporter permease	-
QYM01_RS01550 (QYM01_01550)	oppD	296921..297967 (+)	1047	WP_012678544.1	ABC transporter ATP-binding protein	Regulator
QYM01_RS01555 (QYM01_01555)	amiF	297967..298902 (+)	936	WP_164335393.1	ATP-binding cassette domain-containing protein	Regulator
QYM01_RS01560 (QYM01_01560)	rnjA	299552..301234 (-)	1683	WP_012514941.1	ribonuclease J1	-
QYM01_RS01565 (QYM01_01565)	-	301236..301466 (-)	231	WP_014622279.1	DNA-dependent RNA polymerase subunit epsilon	-
QYM01_RS01570 (QYM01_01570)	tsaB	301751..302449 (+)	699	WP_206158966.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
QYM01_RS01575 (QYM01_01575)	rimI	302452..302877 (+)	426	WP_115250574.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38525.44 Da
• Isoelectric Point: 6.6666

>NTDB_id=853975 QYM01_RS01550 WP_012678544.1 296921..297967(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain BJ-1]
MTNETILSVKNLHVDFKTYAGDVKAIRNISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGDICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQSQTASSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPLPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=853975 QYM01_RS01550 WP_012678544.1 296921..297967(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain BJ-1]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTATGCTGGAGATGTTAAGGCGATTCG
TAATATCAGCTTTGAGCTAAAAAAGGGAGAGACTCTTGCTATTGTGGGAGAATCAGGCTCAGGGAAATCTGTAACCACTC
GCACGCTGATGGGGTTGAATGCTAAGAATGCAAGTATTTCTGGAGACATTTGCTTCAAGGGCAAGCAGCTCAATGAGCTG
AAGGAGGAGGAATGGGTGAAGGTGCGTGGCAATGAAATTGCGATGATCTTCCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGTATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATTCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCTCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAGCTGATGAAGGATATTCAGTCTCAGACCGCATCATCGATTATCTTTATTACGC
ATGACCTTGGTGTTGTTGCTGGAATGGCAGATCGCGTTGCTGTCATGTATGCTGGAAAAATTGTTGAATATGGAACGGTT
GATGAGGTATTTTACCACCCACAGCACCCTTATACCTGGGGATTGCTCAATTCGATGCCTACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCACCAGATTTATTAAACCCTCCAAAGGGTGATGCATTTGCTGCCCGGAATGAGT
TTGCCCTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCATTACGCGGCAACCTGGCTGCTA
GATGAGCGCGCTCCTAAAATAACCCCTCCATTACCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.539	99.713	0.793
amiE	Streptococcus salivarius strain HSISS4	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMG 18311	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMD-9	56.325	95.402	0.537