Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   QYM42_RS11925 Genome accession   NZ_CP129526
Coordinates   2370330..2371616 (-) Length   428 a.a.
NCBI ID   WP_251899974.1    Uniprot ID   -
Organism   Lactococcus lactis strain ZZ-2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2365330..2376616
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYM42_RS11910 (QYM42_11910) - 2366521..2367057 (-) 537 WP_251899973.1 hypothetical protein -
  QYM42_RS11915 (QYM42_11915) - 2367063..2368394 (-) 1332 WP_058203707.1 FAD/NAD(P)-binding oxidoreductase -
  QYM42_RS11920 (QYM42_11920) - 2368410..2370260 (-) 1851 WP_003130592.1 proline--tRNA ligase -
  QYM42_RS11925 (QYM42_11925) eeP 2370330..2371616 (-) 1287 WP_251899974.1 RIP metalloprotease RseP Regulator
  QYM42_RS11930 (QYM42_11930) - 2371635..2372438 (-) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  QYM42_RS11935 (QYM42_11935) - 2372438..2373172 (-) 735 WP_251899975.1 isoprenyl transferase -
  QYM42_RS11940 (QYM42_11940) yajC 2373545..2373877 (-) 333 WP_003130588.1 preprotein translocase subunit YajC -
  QYM42_RS11945 (QYM42_11945) - 2373972..2374670 (-) 699 WP_033900689.1 DNA alkylation repair protein -
  QYM42_RS11950 (QYM42_11950) rlmH 2374689..2375168 (-) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46426.00 Da        Isoelectric Point: 6.7741

>NTDB_id=853958 QYM42_RS11925 WP_251899974.1 2370330..2371616(-) (eeP) [Lactococcus lactis strain ZZ-2]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHIELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVRAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=853958 QYM42_RS11925 WP_251899974.1 2370330..2371616(-) (eeP) [Lactococcus lactis strain ZZ-2]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATATTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATTGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGTCAAGTTGAAAAAGGAACACCCGCTTACAATGCTGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCGAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGTCCAGTTGCTATTTATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGACGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGGGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.845

100

0.572

  eeP Streptococcus thermophilus LMD-9

56.613

100

0.57