Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   V6U69_RS03790 Genome accession   NZ_CP145867
Coordinates   843731..844411 (+) Length   226 a.a.
NCBI ID   WP_225745229.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS10     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 838731..849411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U69_RS03775 (V6U69_03775) - 840011..841279 (-) 1269 WP_225745232.1 nucleobase:cation symporter-2 family protein -
  V6U69_RS03780 (V6U69_03780) - 841279..841860 (-) 582 WP_225745231.1 xanthine phosphoribosyltransferase -
  V6U69_RS03785 (V6U69_03785) - 842541..843362 (+) 822 WP_225745230.1 hypothetical protein -
  V6U69_RS03790 (V6U69_03790) braR 843731..844411 (+) 681 WP_225745229.1 response regulator transcription factor Regulator
  V6U69_RS03795 (V6U69_03795) - 844401..845375 (+) 975 WP_410534219.1 sensor histidine kinase -
  V6U69_RS03800 (V6U69_03800) - 845520..846278 (+) 759 WP_008534947.1 ABC transporter ATP-binding protein -
  V6U69_RS03805 (V6U69_03805) - 846280..848280 (+) 2001 WP_410534220.1 FtsX-like permease family protein -
  V6U69_RS03810 (V6U69_03810) - 848365..848859 (+) 495 WP_002885314.1 YkgJ family cysteine cluster protein -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26072.44 Da        Isoelectric Point: 5.1543

>NTDB_id=853955 V6U69_RS03790 WP_225745229.1 843731..844411(+) (braR) [Streptococcus salivarius strain KSS10]
MHKILLVEDDEVIRQQVKKMLEQWGYEVVLVEDFMEVLSIFVKVEPHLVLMDIGLPLFNGYHWCQEIRKVSKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSYEFGKDQSLLEYMGVILNLKAMDLVYQGEVVSLTKNEFQIL
QVLFDHAGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLKNFIETKKGVGYGLRHDG

Nucleotide


Download         Length: 681 bp        

>NTDB_id=853955 V6U69_RS03790 WP_225745229.1 843731..844411(+) (braR) [Streptococcus salivarius strain KSS10]
ATGCATAAGATTTTATTAGTGGAGGACGACGAGGTTATCCGTCAACAAGTCAAAAAAATGCTAGAACAGTGGGGTTACGA
AGTTGTTCTTGTTGAAGATTTCATGGAAGTATTATCTATTTTTGTAAAAGTAGAGCCCCACTTGGTTCTTATGGACATTG
GTTTACCTCTATTTAATGGTTATCATTGGTGTCAGGAAATTCGTAAGGTCTCCAAGGTGCCTATTATGTTCTTGTCTTCC
AGAGATCAGGCCATGGATATCGTTATGGCAATCAATATGGGTGGGGACGATTTTGTGACTAAACCCTTTGACCAAAATGT
TCTCTTGGCAAAAATTCAAGGGCTTTTGCGCCGATCTTATGAGTTTGGAAAGGATCAGAGTCTTTTGGAATATATGGGTG
TGATTCTGAACCTTAAGGCCATGGATCTGGTTTATCAGGGAGAAGTTGTTTCTTTGACCAAGAACGAGTTTCAGATTTTA
CAAGTTCTCTTCGACCATGCTGGAAATATCGTTAGTCGGGAAGACCTCATGAAGGAGCTTTGGAACAGTGACTTCTTTAT
TGATGATAATACCCTGTCTGTCAATGTGGCACGTTTACGTAAGAAGCTAGAGGCAGTTGGTTTGAAGAACTTTATTGAAA
CCAAGAAAGGTGTCGGTTACGGGTTGCGTCATGATGGATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

51.835

96.46

0.5
  micA Streptococcus pneumoniae Cp1015

35.043

100

0.363