Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   V6U68_RS02460 Genome accession   NZ_CP145866
Coordinates   484563..485369 (+) Length   268 a.a.
NCBI ID   WP_347109898.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS9     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 479563..490369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U68_RS02435 (V6U68_02430) tpiA 479771..480529 (+) 759 WP_002890214.1 triose-phosphate isomerase -
  V6U68_RS02440 (V6U68_02435) recP/tkt 480793..482778 (+) 1986 WP_410531847.1 transketolase Machinery gene
  V6U68_RS02450 (V6U68_02445) tmk 483053..483682 (+) 630 WP_347109901.1 dTMP kinase -
  V6U68_RS02455 (V6U68_02450) - 483691..484566 (+) 876 WP_410531848.1 DNA polymerase III subunit delta' -
  V6U68_RS02460 (V6U68_02455) yaaT 484563..485369 (+) 807 WP_347109898.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  V6U68_RS02465 (V6U68_02460) yabA 485356..485676 (+) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  V6U68_RS02470 (V6U68_02465) rsmI 485679..486545 (+) 867 WP_002890224.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  V6U68_RS02475 (V6U68_02470) - 486744..486947 (+) 204 Protein_439 ammonia permease -
  V6U68_RS02480 (V6U68_02475) - 487071..487727 (+) 657 WP_060971872.1 glycoside hydrolase family 73 protein -
  V6U68_RS02485 (V6U68_02480) - 487745..488566 (+) 822 WP_410531849.1 Cof-type HAD-IIB family hydrolase -
  V6U68_RS02490 (V6U68_02485) - 488584..489093 (-) 510 WP_060971870.1 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29734.14 Da        Isoelectric Point: 4.6456

>NTDB_id=853823 V6U68_RS02460 WP_347109898.1 484563..485369(+) (yaaT) [Streptococcus salivarius strain KSS9]
MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVMENSDFPEVSLPADLNRVEGLAGEKDFARYDENLLK
AEKSMGVVADLITQNQLEMKVVDIVFPLNCSYVLISFVAEKRVDFRQLLKDLASYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDDIETKDGTGQVVAIDVI
AGTIKVVFEKGRAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=853823 V6U68_RS02460 WP_347109898.1 484563..485369(+) (yaaT) [Streptococcus salivarius strain KSS9]
ATGACAGAAGTCATTGGAATAAAATTTGAGGAAACTGGAGCAGTAGAATATGTTGTTCCTGATAAAAATTACGCCAAAGA
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAACGCCTAGCCCAGGTTGTCATGGAAAACTCTGATTTTCCTGAGGTTA
GTTTGCCTGCGGATTTGAATCGGGTTGAAGGATTGGCAGGAGAGAAAGATTTTGCTAGATATGATGAAAATCTTTTGAAG
GCTGAAAAGAGTATGGGAGTAGTAGCTGATTTAATTACTCAAAATCAGCTAGAAATGAAGGTCGTTGATATTGTCTTTCC
GCTAAATTGCTCTTATGTACTAATCAGTTTTGTTGCTGAAAAACGGGTAGATTTTCGTCAGTTGCTCAAAGATTTGGCTT
CTTACTTTAAGACACGTATTGAGTTGCGCCAAATTTCAAGTCGTGAGGAATCAAAGATTTATGGTGGCCTAGGACCTTGT
GGTCGGGCACTTTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCGATTAAGATGGCTAAAAATCAGAGTTTATC
TTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCTAGTTATCCTGACTTGGGTGATGACATTGAAACCAAGGATGGTACAGGTCAGGTCGTTGCCATTGATGTAATT
GCAGGGACCATTAAGGTTGTATTTGAAAAAGGGCGTGCGCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.948

99.627

0.418