Detailed information NTG0085364

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QUE29_RS21615
• Genome accession: NZ_AP027258
• Coordinates: 4389798..4390823 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain JNE151685
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4384798..4395823

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE29_RS21585 (JNE151685_41060)	zapB	4384882..4385127 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
QUE29_RS21590 (JNE151685_41070)	rraA	4385212..4385697 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QUE29_RS21595 (JNE151685_41080)	menA	4385790..4386716 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QUE29_RS21600 (JNE151685_41090)	hslU	4386783..4388114 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
QUE29_RS21605 (JNE151685_41100)	hslV	4388124..4388654 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QUE29_RS21610 (JNE151685_41110)	ftsN	4388747..4389706 (-)	960	WP_000068834.1	cell division protein FtsN	-
QUE29_RS21615 (JNE151685_41120)	cytR	4389798..4390823 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QUE29_RS21620 (JNE151685_41130)	priA	4390979..4393177 (-)	2199	WP_001325632.1	primosomal protein N'	Machinery gene
QUE29_RS21625 (JNE151685_41140)	rpmE	4393380..4393592 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
QUE29_RS21630 (JNE151685_41150)	-	4393647..4394270 (-)	624	WP_182533530.1	TIGR02117 family protein	-
QUE29_RS21635 (JNE151685_41160)	yiiX	4394277..4394885 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
QUE29_RS21640 (JNE151685_41170)	metJ	4395069..4395386 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=85364 QUE29_RS21615 WP_000644904.1 4389798..4390823(-) (cytR) [Escherichia coli strain JNE151685]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=85364 QUE29_RS21615 WP_000644904.1 4389798..4390823(-) (cytR) [Escherichia coli strain JNE151685]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628