Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   V6U66_RS02075 Genome accession   NZ_CP145864
Coordinates   391419..393233 (+) Length   604 a.a.
NCBI ID   WP_410534538.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS7     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 386419..398233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS02055 (V6U66_02060) gdhA 387041..388393 (+) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -
  V6U66_RS02060 (V6U66_02065) - 388674..390215 (+) 1542 WP_206283473.1 hypothetical protein -
  V6U66_RS02065 (V6U66_02070) - 390374..390784 (+) 411 WP_014633541.1 peptide deformylase -
  V6U66_RS02070 (V6U66_02075) rcrR 390972..391415 (+) 444 WP_002885568.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  V6U66_RS02075 (V6U66_02080) rcrP 391419..393233 (+) 1815 WP_410534538.1 ABC transporter ATP-binding protein Regulator
  V6U66_RS02080 (V6U66_02085) rcrQ 393223..395001 (+) 1779 WP_049529161.1 ABC transporter ATP-binding protein Regulator
  V6U66_RS02085 (V6U66_02090) - 395109..395732 (+) 624 WP_002886697.1 GNAT family N-acetyltransferase -
  V6U66_RS02090 (V6U66_02095) - 395880..396503 (+) 624 WP_045769267.1 GTP pyrophosphokinase family protein -
  V6U66_RS02095 (V6U66_02100) - 396505..397182 (+) 678 WP_038675394.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67097.77 Da        Isoelectric Point: 6.1418

>NTDB_id=853580 V6U66_RS02075 WP_410534538.1 391419..393233(+) (rcrP) [Streptococcus salivarius strain KSS7]
MFKIFKRLTTKELIMIVLVVIFVCLNVYLNLKIPDYMSDITTLLSTKGTKASDIFSWNTDAPGMRMLLMSFAGFMASVVV
GFLAARTAASFTTRLRDDIFHQVLDFSDAEIKKFSIPSLLTRTTNDITQLQLVLTMGLQVITQGPIMAIWAITKIADKNG
NWLLALLVAVAVIAILMLFLLIMVMPKQRLIQTLTDKLNSVTRESLTGIRVVRAYNAESYQEDKFEKANTDLTQNNLFIG
RSFALLTPVMTAVSSGLTLAIYWIGAHLIEDVKIPTDPTKIAGAMENKVHLFSDMVVYSSYAMQVVMGFMMMIVVFFLLP
RAVVAASRINEVLDTQSSVSYPENSSEKPKEVGTVEFDDVSFRYSETSEPVLEHVSFKAKKGDTVAFIGSTGSGKSTLVN
LIPRFYDATQGTIKVDGVDVRHYDHETLHNIVGYIPQKAVLFSGDITSNMTMGTSNNSPLDDAKIWEALELAQGKDFVEN
KEGQLKAEVAQAGSNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRKLRQELAEKTQDMTKLIVAQRISTIMDA
DQILVLDQGKVVGQGTHKELLANNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=853580 V6U66_RS02075 WP_410534538.1 391419..393233(+) (rcrP) [Streptococcus salivarius strain KSS7]
ATGTTTAAAATTTTTAAACGTTTGACGACAAAAGAGTTAATCATGATTGTCTTAGTGGTGATTTTTGTTTGCTTGAACGT
CTATCTAAACTTGAAAATTCCAGACTATATGTCTGATATTACGACACTCTTATCAACTAAGGGAACTAAAGCGTCGGATA
TTTTTTCCTGGAATACAGATGCCCCAGGGATGCGAATGCTTTTAATGTCATTTGCAGGCTTTATGGCCTCTGTAGTTGTT
GGTTTCTTAGCTGCCAGAACAGCGGCAAGTTTTACCACCCGTCTTCGTGATGATATCTTCCATCAGGTTCTAGATTTTTC
GGATGCTGAGATTAAGAAATTCTCAATTCCTAGTCTTTTGACCCGTACGACAAATGATATTACCCAATTGCAGCTGGTAC
TTACCATGGGGTTACAGGTTATTACACAGGGGCCTATCATGGCCATTTGGGCGATTACAAAGATTGCCGATAAAAATGGG
AACTGGCTCCTTGCCTTGCTTGTCGCTGTGGCAGTGATTGCTATTCTCATGCTCTTCCTCTTGATTATGGTTATGCCTAA
GCAACGCTTGATTCAAACGCTGACCGATAAACTGAATAGCGTAACGCGTGAATCTCTTACAGGAATTCGTGTGGTGCGTG
CCTATAACGCCGAAAGTTATCAAGAGGATAAATTTGAAAAGGCCAATACTGATTTGACCCAAAACAATCTCTTTATCGGT
CGTTCTTTTGCCTTACTGACACCGGTGATGACTGCTGTATCAAGTGGTTTGACACTAGCTATTTATTGGATTGGTGCGCA
TTTGATTGAAGATGTTAAGATTCCAACAGATCCAACTAAGATTGCTGGTGCCATGGAAAATAAGGTCCATCTCTTCTCAG
ACATGGTGGTTTATTCATCTTATGCCATGCAGGTTGTTATGGGATTCATGATGATGATTGTTGTTTTCTTCCTTCTTCCA
CGTGCAGTTGTAGCAGCTAGTCGTATCAATGAAGTTCTAGATACCCAATCTTCAGTCTCTTATCCTGAAAATAGTTCTGA
AAAACCTAAAGAAGTGGGTACTGTCGAATTTGATGATGTTTCTTTCCGTTATTCTGAAACTTCAGAGCCTGTTTTGGAGC
ATGTTAGCTTCAAAGCTAAAAAAGGTGACACGGTTGCCTTTATTGGTTCGACTGGATCTGGTAAATCAACGCTTGTCAAC
CTTATCCCACGTTTTTATGATGCCACGCAAGGAACGATCAAGGTTGACGGAGTAGATGTGCGACATTATGACCATGAAAC
CTTGCACAATATAGTTGGTTATATTCCACAGAAGGCTGTGCTTTTCTCAGGTGATATCACGTCAAATATGACGATGGGAA
CGAGCAATAACAGTCCCCTTGATGATGCTAAGATTTGGGAAGCCCTCGAATTGGCTCAAGGAAAAGACTTTGTTGAAAAT
AAAGAAGGTCAACTTAAAGCAGAAGTTGCCCAAGCCGGGTCTAACTTCTCAGGTGGACAGAAGCAACGTTTGGCTATTGC
GCGTGCCTTGGCACGTAAGCCTGAAATCTTGATTTTCGATGATTCCTTCTCAGCCTTGGACTATAAGACCGATCGTAAGT
TACGTCAAGAATTGGCTGAAAAAACACAAGATATGACCAAGTTGATTGTTGCCCAACGTATCTCTACTATTATGGATGCG
GACCAAATCTTGGTACTTGACCAAGGTAAGGTCGTTGGTCAAGGGACTCACAAGGAACTCTTGGCAAATAATGAGGTTTA
CCAAGAAATTGCCTATTCACAATTGTCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-271)

ABC transporter (ABC_tran)

(372-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.264

100

0.684