Detailed information NTG0853532

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: V6U65_RS08460
• Genome accession: NZ_CP145863
• Coordinates: 1853122..1856442 (-)
• Length: 1106 a.a.
• NCBI ID: WP_410532357.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1848122..1861442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U65_RS08450 (V6U65_08445)	-	1848394..1849125 (+)	732	WP_013991143.1	DUF554 domain-containing protein	-
V6U65_RS08455 (V6U65_08450)	rexA	1849479..1853132 (-)	3654	WP_410532356.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
V6U65_RS08460 (V6U65_08455)	rexB	1853122..1856442 (-)	3321	WP_410532357.1	ATP-dependent nuclease subunit B	Machinery gene
V6U65_RS08465 (V6U65_08460)	-	1856691..1858064 (-)	1374	WP_410532358.1	GHKL domain-containing protein	-
V6U65_RS08470 (V6U65_08465)	-	1858099..1859409 (-)	1311	WP_014635015.1	hypothetical protein	-
V6U65_RS08475 (V6U65_08470)	-	1859690..1861429 (-)	1740	WP_410532359.1	DUF6287 domain-containing protein	-

Sequence

Protein

• Length: 1106 a.a.
• Molecular weight: 125928.08 Da
• Isoelectric Point: 4.8179

>NTDB_id=853532 V6U65_RS08460 WP_410532357.1 1853122..1856442(-) (rexB) [Streptococcus salivarius strain KSS6]
MKLLYTDMSQDLTEILTEQATSYAQKGKRVFYIAPNALSFEKERKVLEYLPQSASFEITVTRFTQMARYFILNTSNPKTQ
LDDTGLAMIFYKVLSHTGDDELKVYGRLRKDSNFINQLVDLYKELQQANMTVLDLQHLDQAEKQENLVRIFSAAQDLLLA
GDFDNQSKLSAFFKEIASGHLDKALSNTVLVIDGFTRFSAEEEALVTLLNDKCHQIVIGTYASQKAYRANFVYGNVYQAS
VDFLRTLAQTYKVTPDYVTTDKEGNPSFARISRLLESRHDFSTVDEQLTAQDKQALQVWEVVNQKEEVAQVAKSIRQLLA
DGKRYKDILVLLGDEESYKLQVGQIFRKFDIPYYFGKEETMSSHPLVQFVDSLERIKRYNYRAEDLLNLVKSGLYGGFAQ
EDLDLFEYYVNFADIKGRHKFLSDFTANSRDKYDLDQLNTLRSQLVEPLDKLLNSRKQKGSSLLKKLVVFLEAVQVPSQM
ASLTAKASEAEKEQNEQVWKAFTQLLEQVETIFGEETLSVDDFLSILRSGMLACDYRTVPATVDVVNVKKYDLIQPHSAP
YVFALGMTQSHFPKVGQNKSLLSDEERSRINEATDEHRSLDIVTQSNSQRGHFVAMSLFNAASEQLVLSQPQILNETQDD
MSVYLKELLDLGLPLVEKGRNRFEAKGDQIGNYKDLLSTVIALNSSHLDADLDKETQTFWSVAVRYLRKRLDKDQVLIPN
VIDDVTTTKVDDQVMQLVFPGEEPLKLSASALTTFYNNQYLYFLRYVLGLEELESIHPDARHHGTYLHRVFERVMGDSSS
ENFDDKLEKAIAQTNQEQPFELLYTEDQESRLSRQILEDIARSTASVLRDNAAVKVEREEAKFDLLLANSIKITGIIDRV
DRLTDGALGVVDYKSGKNVFDIQKFYNGLSPQLVTYLEALRQTYKVDADQLFGAMYLHMQDPQLNLAQFGLDKLAAQAHK
ELTYKGLFVASETEHLAGGNYDLQKTVTYDKEDLETLLDYNIKLFTSAAEVIRSGNFAVNPYTEDGKSVQGDQIKAITHF
EADRHMGQARKLLRLPSKGKKEAYLELMAKDEDDNEMQVAETIVPFPVTDQAVTADNKDQEDNHVD

Nucleotide

• Length: 3321 bp

>NTDB_id=853532 V6U65_RS08460 WP_410532357.1 1853122..1856442(-) (rexB) [Streptococcus salivarius strain KSS6]
ATGAAATTACTTTATACGGATATGTCTCAGGATTTAACAGAAATTCTGACGGAGCAGGCAACCAGCTATGCTCAAAAGGG
AAAGAGGGTCTTTTATATTGCCCCTAATGCCCTGTCATTTGAGAAGGAGCGTAAGGTCTTGGAATACCTGCCTCAGTCAG
CATCCTTTGAGATTACGGTGACTCGTTTTACTCAGATGGCGAGATACTTTATTCTCAATACGAGCAACCCCAAAACGCAG
CTGGATGATACTGGTCTGGCCATGATTTTTTATAAGGTGTTGTCGCATACGGGCGATGATGAGCTCAAGGTTTATGGCCG
TTTGCGCAAGGATAGTAACTTTATTAATCAATTGGTAGACCTTTACAAAGAGTTGCAGCAGGCTAATATGACGGTTCTGG
ATTTGCAGCATTTGGATCAGGCAGAGAAACAAGAGAATTTGGTAAGGATTTTCAGTGCGGCTCAAGACCTCTTGTTGGCA
GGAGATTTTGACAATCAATCAAAACTCAGTGCCTTCTTCAAAGAGATTGCCTCAGGACATCTGGATAAGGCTCTAAGTAA
TACGGTTCTGGTCATTGATGGCTTTACGCGTTTCTCAGCTGAAGAGGAGGCTTTGGTTACCCTCTTAAATGATAAGTGCC
ACCAGATTGTCATTGGAACTTATGCCAGTCAAAAGGCTTATAGGGCTAATTTTGTCTATGGCAATGTTTATCAAGCTTCA
GTGGATTTTCTGAGAACTCTGGCTCAGACTTATAAGGTGACACCTGACTACGTGACGACAGACAAAGAGGGCAATCCTTC
TTTTGCACGTATTAGCCGTCTTTTGGAAAGCCGTCATGATTTTAGTACGGTAGATGAGCAGCTGACTGCTCAGGACAAGC
AAGCCTTGCAGGTCTGGGAAGTGGTCAACCAAAAGGAAGAGGTGGCTCAGGTTGCCAAGAGTATTCGTCAGTTGCTGGCG
GATGGCAAGCGCTACAAGGATATTTTGGTCTTGCTAGGTGATGAGGAGAGTTATAAGCTTCAGGTGGGGCAGATTTTCCG
AAAATTTGATATTCCCTATTATTTCGGGAAGGAAGAAACCATGTCTAGCCACCCTTTGGTGCAGTTTGTGGATTCGCTGG
AACGTATCAAGCGCTATAATTACCGTGCCGAGGATTTGCTTAATCTCGTAAAATCCGGTCTCTATGGTGGTTTTGCTCAA
GAGGATTTAGACCTTTTTGAATATTATGTCAATTTTGCAGATATCAAGGGGCGTCACAAGTTCCTTTCTGATTTCACGGC
TAATAGTCGTGATAAGTATGATTTGGATCAGCTCAATACCTTGAGATCACAACTGGTAGAGCCCTTGGACAAGTTGCTTA
ACAGTCGCAAACAGAAGGGGTCTAGTCTGCTCAAGAAACTTGTGGTCTTTTTAGAGGCTGTGCAAGTGCCAAGTCAGATG
GCTAGTTTGACTGCCAAGGCCAGTGAAGCTGAAAAAGAGCAGAATGAACAGGTCTGGAAGGCCTTCACGCAACTCTTGGA
GCAGGTTGAGACAATCTTTGGGGAAGAAACACTTTCAGTGGATGACTTTTTGTCTATCTTGCGTTCGGGCATGTTGGCCT
GTGATTACCGTACGGTCCCAGCTACTGTTGATGTGGTCAATGTGAAGAAATACGATTTGATTCAACCACACTCTGCTCCT
TATGTTTTTGCCTTGGGCATGACCCAGTCACATTTTCCAAAGGTAGGGCAAAATAAGAGTCTCCTGTCTGACGAGGAACG
TAGTCGTATCAATGAAGCTACGGATGAACACCGGAGTTTGGATATTGTTACGCAGAGCAATAGTCAGCGGGGGCATTTTG
TGGCTATGTCACTTTTTAATGCAGCTAGTGAACAATTGGTGCTTAGTCAGCCACAAATTCTCAATGAGACTCAAGATGAC
ATGTCGGTTTATTTGAAGGAGCTGCTTGACCTTGGTCTTCCTTTGGTTGAAAAGGGACGTAATCGTTTCGAGGCTAAGGG
TGACCAGATTGGGAACTACAAGGACCTTCTATCAACTGTCATCGCCCTTAACAGTAGCCATCTAGATGCTGATTTGGACA
AGGAAACGCAGACTTTCTGGTCAGTTGCGGTGCGTTATCTCCGTAAGCGACTTGATAAGGACCAAGTCTTGATTCCAAAT
GTGATTGACGATGTGACGACGACCAAGGTTGATGATCAGGTCATGCAGCTGGTCTTTCCGGGGGAAGAACCACTGAAATT
ATCAGCCTCGGCTCTGACGACCTTCTATAACAACCAATATCTTTATTTCTTGCGTTATGTTTTGGGGCTTGAAGAGTTGG
AGTCCATCCATCCAGATGCTCGACACCATGGGACTTACTTGCACCGTGTCTTTGAGCGTGTCATGGGTGATTCTTCGTCA
GAAAACTTCGATGATAAATTGGAAAAGGCTATTGCTCAGACCAATCAGGAACAACCCTTTGAACTTCTCTATACAGAGGA
CCAAGAGAGTCGCTTATCTCGTCAGATTTTAGAAGATATCGCCCGATCAACTGCCAGTGTTTTGCGTGATAATGCGGCTG
TTAAGGTTGAGCGTGAGGAAGCCAAGTTTGACTTGCTTTTAGCAAATAGCATCAAGATTACAGGGATTATTGACCGTGTG
GACCGTTTAACGGATGGGGCTCTGGGTGTCGTTGACTACAAATCAGGTAAAAATGTCTTTGACATTCAGAAATTCTACAA
TGGTCTCAGTCCGCAATTGGTAACCTATCTAGAAGCTCTTCGCCAGACCTATAAGGTTGATGCTGATCAGCTTTTTGGTG
CCATGTATCTTCACATGCAGGACCCACAGCTTAACCTAGCTCAGTTTGGTCTGGATAAGTTAGCAGCTCAGGCTCATAAG
GAATTGACCTATAAGGGACTTTTTGTGGCTTCAGAAACGGAGCATCTGGCTGGTGGAAACTATGATTTACAAAAGACTGT
CACCTATGATAAGGAGGACCTAGAAACCTTGCTTGATTACAATATTAAGCTGTTTACAAGTGCTGCTGAAGTTATTCGAA
GCGGGAATTTTGCGGTTAATCCTTATACTGAGGATGGCAAGTCTGTCCAAGGAGATCAAATCAAGGCTATTACTCATTTT
GAAGCCGACCGCCACATGGGACAGGCTCGAAAACTCTTGCGTTTACCAAGTAAGGGCAAGAAGGAAGCCTATTTGGAGCT
GATGGCAAAAGATGAGGACGATAATGAGATGCAAGTTGCTGAAACTATCGTCCCCTTTCCAGTCACTGATCAAGCTGTGA
CAGCAGACAACAAAGACCAGGAGGACAACCATGTTGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (747-1023)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	43.618	98.463	0.429