Detailed information NTG0853507

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QYL88_RS06200
• Genome accession: NZ_CP129460
• Coordinates: 1333640..1334614 (+)
• Length: 324 a.a.
• NCBI ID: WP_065354203.1
• Uniprot ID: -
• Organism: Staphylococcus pseudintermedius strain N9-1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1328640..1339614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYL88_RS06165	rpmG	1329024..1329188 (+)	165	WP_256726578.1	50S ribosomal protein L33	-
QYL88_RS06170	-	1329340..1329879 (+)	540	WP_014613814.1	5-formyltetrahydrofolate cyclo-ligase	-
QYL88_RS06175	-	1329898..1331337 (+)	1440	WP_065354201.1	rhomboid family intramembrane serine protease	-
QYL88_RS06180	-	1331339..1331542 (+)	204	WP_014613816.1	YqgQ family protein	-
QYL88_RS06185	-	1331539..1332525 (+)	987	WP_014613817.1	ROK family glucokinase	-
QYL88_RS06190	-	1332526..1332837 (+)	312	WP_014613818.1	MTH1187 family thiamine-binding protein	-
QYL88_RS06195	-	1332850..1333479 (+)	630	WP_065354202.1	MBL fold metallo-hydrolase	-
QYL88_RS06200	comGA	1333640..1334614 (+)	975	WP_065354203.1	competence type IV pilus ATPase ComGA	Machinery gene
QYL88_RS06205	comGB	1334583..1335650 (+)	1068	WP_014613821.1	competence type IV pilus assembly protein ComGB	-
QYL88_RS06210	comGC	1335663..1335986 (+)	324	WP_015729165.1	competence type IV pilus major pilin ComGC	Machinery gene
QYL88_RS06215	comGD	1335964..1336404 (+)	441	WP_014613823.1	competence type IV pilus minor pilin ComGD	-
QYL88_RS06220	-	1336509..1336709 (+)	201	WP_020219623.1	hypothetical protein	-
QYL88_RS06225	-	1336615..1337100 (+)	486	WP_080552896.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
QYL88_RS06230	-	1337264..1337791 (+)	528	WP_014613826.1	shikimate kinase	-
QYL88_RS06235	gcvT	1337949..1339040 (+)	1092	WP_065354204.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36904.61 Da
• Isoelectric Point: 7.2823

>NTDB_id=853507 QYL88_RS06200 WP_065354203.1 1333640..1334614(+) (comGA) [Staphylococcus pseudintermedius strain N9-1]
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KELYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSHKLQLLNKEGVIDEKILR
KYTI

Nucleotide

• Length: 975 bp

>NTDB_id=853507 QYL88_RS06200 WP_065354203.1 1333640..1334614(+) (comGA) [Staphylococcus pseudintermedius strain N9-1]
ATGCAACTACTATTAGATCATGTAATACAATTTGCACTTCAAAATGAGGCATCAGACATTCATTTTATCCCATCACAATC
ACAAGTCGAAGTGAAACTCAGAGTGAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACGTATCAAAAATTGT
TAACTTTGTTGAAATACCAAGCTGGATTAGATATTTCGACACGCCACAAAGCGCAAAGTGGGCGCTATATTTATGAACAT
AAAGAGTTATATTATTTAAGAGTGTCCACGTTACCTTTAAACTTAGGTACTGAAAGTTGTGTTATTCGTATTACACCACA
ATATTTTCAAAATGCGAAAGCTCATAGTGTATTAGACATCAAATCTAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GCGGGCCTACAGGTGCAGGAAAGAGCACGTTAATGTATCAAATGGTCGTCTATGCTAAACAAAAGTTAAACCTGAATATT
ATCACAATAGAAGACCCGGTCGAGCAGCTTGTGAACGGCATTACGCAAATTTCCGTTAACGAAAAAGCTGATATTACGTA
TGGATCGTCGTTAAAAGCAATTCTTCGTTGTGATCCAGATGTCATCTTAATTGGTGAGATTCGTGACAGTCATATTGCAA
GGGACGTTATACAAGCGAGTTTAAGTGGGCATTTAGTATTGTCGACGATACACGCCAATGATTGTCAAGGGGTGCTCCTT
AGACTGATTGAAATGGGACTCTCTCACCAAGATTTATCTCAATCTATCAATCTCATCATCAATCAAAGACTCATTACAAC
AAAAAACGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAGGAGATTCATTACTTTTTGAATAATAACTTCCAAC
TACCTACTGCTTTCACAAGCCTTTCTCATAAGCTTCAACTTCTGAATAAAGAGGGGGTTATAGATGAAAAGATTTTACGA
AAGTATACGATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (9-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	58.514	99.691	0.583
comGA	Staphylococcus aureus N315	58.514	99.691	0.583