Detailed information NTG0853483

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QY487_RS16580
• Genome accession: NZ_CP129459
• Coordinates: 3362827..3363990 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SSF6
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3357827..3368990

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QY487_RS16550 (QY487_16550)	-	3358092..3358511 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
QY487_RS16555 (QY487_16555)	comFC	3358585..3359274 (-)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
QY487_RS16560 (QY487_16560)	-	3359280..3359564 (-)	285	WP_017418816.1	competence protein ComFB	-
QY487_RS16565 (QY487_16565)	comFA	3359622..3361007 (-)	1386	WP_094247454.1	DEAD/DEAH box helicase	Machinery gene
QY487_RS16570 (QY487_16570)	-	3361115..3361963 (-)	849	WP_003151387.1	DegV family protein	-
QY487_RS16575 (QY487_16575)	degU	3362061..3362750 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QY487_RS16580 (QY487_16580)	degS	3362827..3363990 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
QY487_RS16585 (QY487_16585)	-	3364213..3364860 (+)	648	WP_060657503.1	YigZ family protein	-
QY487_RS16590 (QY487_16590)	-	3364865..3366040 (+)	1176	WP_071392366.1	LCP family protein	-
QY487_RS16595 (QY487_16595)	-	3366130..3367206 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
QY487_RS16600 (QY487_16600)	-	3367339..3368535 (-)	1197	WP_094247452.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=853483 QY487_RS16580 WP_003151385.1 3362827..3363990(-) (degS) [Bacillus velezensis strain SSF6]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=853483 QY487_RS16580 WP_003151385.1 3362827..3363990(-) (degS) [Bacillus velezensis strain SSF6]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948