Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   J3989_RS03055 Genome accession   NZ_AP024489
Coordinates   618265..618960 (+) Length   231 a.a.
NCBI ID   WP_002243223.1    Uniprot ID   -
Organism   Neisseria meningitidis strain NIID777     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 613265..623960
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J3989_RS03035 (NMNIID777_05600) - 613884..614282 (+) 399 WP_002216361.1 DoxX family protein -
  J3989_RS03040 (NMNIID777_05610) - 614331..614936 (+) 606 WP_002230218.1 nitroreductase family protein -
  J3989_RS03045 (NMNIID777_05620) - 615122..617232 (+) 2111 Protein_592 TonB-dependent receptor -
  J3989_RS03050 (NMNIID777_05640) - 617435..618094 (+) 660 WP_002218694.1 NYN domain-containing protein -
  J3989_RS03055 (NMNIID777_05650) dsbA2 618265..618960 (+) 696 WP_002243223.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  J3989_RS03060 (NMNIID777_05660) ffh 619293..620663 (-) 1371 WP_101116367.1 signal recognition particle protein -
  J3989_RS03065 (NMNIID777_05670) - 620883..621689 (+) 807 WP_002221447.1 inner membrane protein YpjD -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25476.01 Da        Isoelectric Point: 5.1502

>NTDB_id=85338 J3989_RS03055 WP_002243223.1 618265..618960(+) (dsbA2) [Neisseria meningitidis strain NIID777]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADIDTLKKWLSEQTAF
DGKKVLAAFEAPESQARSAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=85338 J3989_RS03055 WP_002243223.1 618265..618960(+) (dsbA2) [Neisseria meningitidis strain NIID777]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCGTTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCTGATATCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTTCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATCGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

98.701

100

0.987

  dsbA1 Neisseria meningitidis MC58

70.386

100

0.71


Multiple sequence alignment