Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   V6U63_RS02425 Genome accession   NZ_CP145861
Coordinates   476348..477154 (+) Length   268 a.a.
NCBI ID   WP_022496583.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS3     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 471348..482154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U63_RS02400 (V6U63_02405) tpiA 471499..472257 (+) 759 WP_002885895.1 triose-phosphate isomerase -
  V6U63_RS02405 (V6U63_02410) recP/tkt 472561..474546 (+) 1986 WP_022496580.1 transketolase Machinery gene
  V6U63_RS02415 (V6U63_02420) tmk 474838..475467 (+) 630 WP_022496581.1 dTMP kinase -
  V6U63_RS02420 (V6U63_02425) - 475476..476351 (+) 876 WP_022496582.1 DNA polymerase III subunit delta' -
  V6U63_RS02425 (V6U63_02430) yaaT 476348..477154 (+) 807 WP_022496583.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  V6U63_RS02430 (V6U63_02435) yabA 477141..477461 (+) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  V6U63_RS02435 (V6U63_02440) rsmI 477464..478330 (+) 867 WP_410535236.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  V6U63_RS02440 (V6U63_02445) - 478467..479702 (+) 1236 WP_002886194.1 ammonium transporter -
  V6U63_RS02445 (V6U63_02450) - 479713..480054 (+) 342 WP_002886165.1 P-II family nitrogen regulator -
  V6U63_RS02450 (V6U63_02455) - 480145..480801 (+) 657 WP_002886075.1 glucosaminidase domain-containing protein -
  V6U63_RS02455 (V6U63_02460) - 480819..481640 (+) 822 WP_002885966.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29885.39 Da        Isoelectric Point: 4.6550

>NTDB_id=853256 V6U63_RS02425 WP_022496583.1 476348..477154(+) (yaaT) [Streptococcus salivarius strain KSS3]
MTEVIGIKFEETGTIEYVVPDRNYAKDDFVVVLEKKDKRLAQVVMENTDFPELSLPADLNRVEGLAGEKDFARYEENLLK
AEKSMGVVADLIAQNQLDMKVVDIVFPLNNSYVLISFVAEKRVDFRQLLKDLASYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRESKASYPDLGDEIETKDGMGQVVAIDVI
AGTIKVVFEKGRAPLIYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=853256 V6U63_RS02425 WP_022496583.1 476348..477154(+) (yaaT) [Streptococcus salivarius strain KSS3]
ATGACTGAAGTCATTGGAATAAAATTTGAAGAAACTGGTACAATAGAATATGTTGTACCTGATAGAAATTATGCCAAAGA
TGACTTTGTGGTCGTTTTGGAGAAAAAAGATAAACGCCTAGCTCAGGTTGTCATGGAAAACACAGATTTTCCTGAGCTTA
GTTTGCCTGCGGATTTGAATCGGGTTGAAGGATTGGCAGGAGAGAAAGATTTTGCTAGATATGAGGAAAATCTTTTGAAG
GCTGAAAAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAGGTGGTTGATATTGTCTTTCC
GCTAAATAACTCTTATGTGTTAATCAGTTTTGTAGCTGAAAAACGGGTAGATTTTCGTCAGTTGCTCAAAGATTTGGCAT
CTTACTTTAAGACACGCATTGAGTTGCGTCAAATTTCAAGTCGTGAGGAATCAAAGATTTATGGTGGTTTAGGACCTTGT
GGACGTGCACTTTGTTGTTCTAGCTTTTTGGGTGAATTTCCACCGGTGTCGATTAAGATGGCTAAAAATCAGAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGCCGACTCATGTGCTGTCTCAGTTATGAAGATGATTTTTACAGAGAAA
GCAAGGCTAGTTATCCTGACTTGGGTGATGAAATTGAAACCAAGGATGGCATGGGTCAAGTTGTTGCCATTGATGTGATC
GCAGGGACTATTAAGGTTGTGTTTGAAAAAGGGCGTGCGCCCCTAATTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

43.346

98.134

0.425