Detailed information NTG0853142

Bioinformatically predicted

Overview

• Name: tfoS
• Type: Regulator
• Locus tag: QYQ96_RS04035
• Genome accession: NZ_CP129421
• Coordinates: 840472..843819 (+)
• Length: 1115 a.a.
• NCBI ID: WP_304572555.1
• Uniprot ID: -
• Organism: Vibrio metoecus strain ZF102
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 835472..848819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYQ96_RS04010 (QYQ96_04010)	sucC	835617..836783 (+)	1167	WP_304572553.1	ADP-forming succinate--CoA ligase subunit beta	-
QYQ96_RS04015 (QYQ96_04015)	sucD	836783..837655 (+)	873	WP_000025475.1	succinate--CoA ligase subunit alpha	-
QYQ96_RS04020 (QYQ96_04020)	znuB	837742..838524 (-)	783	WP_055035440.1	zinc ABC transporter permease subunit ZnuB	-
QYQ96_RS04025 (QYQ96_04025)	znuC	838517..839305 (-)	789	WP_000212416.1	zinc ABC transporter ATP-binding protein ZnuC	-
QYQ96_RS04030 (QYQ96_04030)	znuA	839388..840272 (+)	885	WP_304572554.1	zinc ABC transporter substrate-binding protein ZnuA	-
QYQ96_RS04035 (QYQ96_04035)	tfoS	840472..843819 (+)	3348	WP_304572555.1	helix-turn-helix domain-containing protein	Regulator
QYQ96_RS04040 (QYQ96_04040)	-	844363..844593 (+)	231	WP_000777867.1	FeoA family protein	-
QYQ96_RS04045 (QYQ96_04045)	feoB	844590..846866 (+)	2277	WP_304572556.1	Fe(2+) transporter permease subunit FeoB	-
QYQ96_RS04050 (QYQ96_04050)	-	846863..847093 (+)	231	WP_000604018.1	FeoC-like transcriptional regulator	-
QYQ96_RS04055 (QYQ96_04055)	-	847199..847636 (-)	438	WP_000929909.1	HIT domain-containing protein	-

Sequence

Protein

• Length: 1115 a.a.
• Molecular weight: 126604.27 Da
• Isoelectric Point: 7.1972

>NTDB_id=853142 QYQ96_RS04035 WP_304572555.1 840472..843819(+) (tfoS) [Vibrio metoecus strain ZF102]
MYRTLLYSFLLNLIFPSLVLALDKSMSVFYPLPIQEQGKVIVAQNLYLGTDGGIWMHDVHGKVMYFDGQNILPRRGSVLP
QTSSHIVYANSAFWTFEQHELFRTYPAGHKALMLSLTPGTQINQIGSSNGMIWMTDNDNFYSYEIRSGRVSTLSLHELYQ
LNSASTVVINDAQFLVSKWALATNVGVYLSDEQGFSHVKKSGKHFVQKLYFSHKRRELLVGSKRGALIIDIENKRSLPDR
IGSSHVLSMAETEKEYWVGTEEGLYVYSFITGKIVQLESNSNNEYALLGKKIYAMVNDFQGGMWIATDKGVFYYSLFGQQ
FTRYPTQALSNDGSKAQISKIKALNSDGDYLAITQQGLYNFNVADDLRKHLIYPGKVNDFAINGENIWIATDKGLARYNL
SRRSIDTPHLPLALLQTPVEHLTIDGSGNLWGSSNHQIWSYSIIQQSFVDYGSEWMVKQFSPSRITLLAAVEQGIVIGTE
HGAYSLFGKQIRFDFSSHRYGEIVQVAQNALGDVWIIGAYGVFLWHQDQPEAVPVELIEENIQPLCIAESKQGMWLISSQ
GISHYSDQGQLNKNFSAPYGLISHEFLPASCAVGEEKESSSLVIGSQLGIVKVNTEELAVSNLPNIQVMFSQVSVNHRPK
LLGYRTPHPLKIRYGDAISFQFGALPSARSQSLEYKLNDDQQWQRFDWALLSFDKLLPGKYRLKVRSANPIQRYRTEALF
DFEVMEPWYMTSVAIVGYVVALFGLLAVAFWWRTRMIVGANRKLKAQVDLKTSQLRHQSKIVLSNNHQLRKQLQLHHNLL
GKVLESVDPSLRHLSSYAKVRGWNEFDAPLNKVKQELAQLHFMHRGDAEESKFHDLHLLIESALKSWQEEYSKAAIKLIY
HGETRFIEVRQFNLDVLFNAILTDAIKRLYKYQELQIQLEARDEQAVLIFSDFGSPIQNLGSMLVTLTGFGTYPLQELIS
RSGGELRVLVLKERNVIELAWPLASIPEIESLKQEVVEIEQKSAIDDVEKEWLSKLEKLIEQNYSDPNFTTSTAAQSLYV
SERSLQRRFKAATGKTFKESLNELRLEKACQSLLSGAKIAQVAFDCGFNDPSYFSQRFKHHFGLSPSQFIEDQES

Nucleotide

• Length: 3348 bp

>NTDB_id=853142 QYQ96_RS04035 WP_304572555.1 840472..843819(+) (tfoS) [Vibrio metoecus strain ZF102]
GTGTATCGCACATTGTTATACAGCTTCTTGCTGAATCTTATTTTTCCTTCACTGGTGTTGGCTTTAGATAAGTCAATGTC
AGTTTTTTATCCTTTGCCAATCCAAGAGCAGGGGAAAGTCATTGTTGCTCAAAACCTCTATCTTGGTACGGATGGCGGTA
TCTGGATGCATGATGTGCATGGAAAAGTCATGTATTTTGATGGGCAAAATATCCTGCCCCGTCGTGGTTCTGTACTTCCG
CAAACGTCGAGTCACATTGTTTACGCAAATAGTGCTTTTTGGACATTTGAACAACATGAATTGTTTCGAACCTATCCTGC
GGGGCACAAGGCGTTGATGTTAAGCCTAACGCCAGGAACCCAAATCAATCAGATTGGCTCATCGAACGGTATGATCTGGA
TGACAGATAATGACAATTTCTACAGCTATGAAATTCGAAGTGGGCGAGTATCGACGCTTTCACTGCATGAGTTATATCAA
TTGAATAGCGCTAGTACGGTTGTCATAAATGATGCACAGTTCTTGGTTTCAAAGTGGGCGTTAGCGACGAATGTGGGTGT
TTATTTGTCTGACGAACAAGGCTTTTCTCATGTAAAAAAATCCGGAAAACATTTTGTTCAGAAGCTTTATTTCTCTCATA
AACGCCGAGAATTATTGGTTGGCTCTAAGCGCGGAGCGTTAATTATTGATATTGAAAACAAGCGCTCACTACCGGATCGA
ATTGGCTCATCGCATGTCCTATCCATGGCGGAAACAGAAAAAGAGTATTGGGTTGGCACCGAAGAGGGCCTTTATGTTTA
CTCCTTTATTACGGGAAAAATAGTTCAATTAGAAAGTAATAGTAATAATGAGTACGCTCTACTGGGTAAAAAAATCTATG
CGATGGTGAATGATTTTCAGGGGGGAATGTGGATCGCAACCGATAAAGGTGTGTTCTATTATTCTTTATTTGGGCAGCAG
TTTACGCGTTACCCTACTCAAGCATTATCGAACGACGGTAGTAAGGCACAGATCAGTAAAATCAAGGCATTAAACTCGGA
TGGTGATTATTTGGCCATCACACAGCAAGGGTTGTATAACTTTAATGTCGCTGATGATTTACGTAAACACCTCATCTATC
CCGGTAAGGTCAACGACTTTGCCATCAACGGTGAGAATATATGGATAGCAACAGACAAAGGATTGGCTCGTTATAATCTT
TCTCGTCGTAGTATTGACACTCCTCATCTACCGCTAGCATTGCTACAAACACCAGTTGAACACCTCACTATTGACGGCAG
CGGTAACTTATGGGGTTCAAGTAATCACCAGATTTGGTCATATTCAATCATTCAGCAAAGCTTTGTGGATTATGGTTCGG
AATGGATGGTTAAACAATTTTCACCATCTCGAATCACCCTTCTTGCCGCTGTAGAGCAAGGCATTGTTATTGGCACTGAG
CATGGTGCTTACTCTTTATTTGGAAAACAGATTCGTTTCGATTTCTCCAGTCATCGTTATGGTGAAATTGTGCAAGTGGC
GCAAAATGCCTTGGGTGATGTCTGGATTATTGGCGCTTATGGTGTTTTTTTGTGGCATCAAGATCAACCGGAAGCGGTAC
CAGTAGAATTAATTGAAGAGAATATTCAACCTCTGTGTATTGCTGAATCCAAGCAAGGTATGTGGCTTATTTCATCGCAG
GGAATAAGCCACTATAGCGACCAAGGTCAATTGAATAAAAACTTTAGCGCCCCTTATGGTTTAATCAGTCATGAATTTCT
TCCCGCCTCTTGCGCAGTCGGTGAAGAAAAAGAAAGTTCATCTCTGGTTATTGGTTCACAATTGGGAATAGTGAAAGTCA
ACACGGAAGAATTGGCAGTATCAAATTTACCTAATATTCAGGTTATGTTTAGCCAAGTGAGCGTTAACCATAGGCCTAAG
TTGTTGGGGTATCGTACCCCCCATCCTCTGAAGATTCGTTATGGCGATGCGATCAGTTTCCAGTTTGGGGCTTTGCCTTC
TGCGCGCAGCCAATCGTTAGAATACAAATTGAATGATGATCAACAGTGGCAACGATTTGATTGGGCTCTGTTGAGTTTTG
ATAAGTTATTACCCGGTAAATATCGCCTAAAAGTGCGTAGTGCAAACCCTATTCAGCGCTATCGAACGGAAGCTTTGTTT
GATTTTGAAGTGATGGAGCCTTGGTACATGACTTCAGTGGCGATTGTTGGTTATGTTGTGGCTTTATTCGGGCTACTTGC
TGTGGCGTTTTGGTGGCGAACCCGCATGATTGTTGGCGCTAACCGAAAGTTAAAGGCGCAAGTTGATCTGAAAACGAGTC
AGTTGCGCCATCAAAGTAAAATAGTATTGAGCAATAACCATCAATTGCGAAAGCAACTGCAACTTCACCACAATTTATTA
GGAAAGGTTTTAGAGAGCGTAGACCCATCATTACGGCACCTATCTTCGTATGCCAAAGTTCGAGGTTGGAATGAGTTTGA
CGCTCCCCTGAATAAAGTGAAGCAAGAATTGGCACAGTTGCACTTTATGCATCGTGGTGATGCAGAGGAGAGTAAGTTTC
ATGATTTACACTTACTGATCGAGTCAGCCTTAAAGAGTTGGCAGGAAGAGTACAGTAAAGCGGCAATCAAGCTTATTTAC
CACGGTGAAACTCGCTTTATCGAAGTCCGCCAATTTAATCTTGATGTACTGTTTAACGCGATTTTGACGGATGCGATTAA
ACGACTTTATAAATATCAAGAATTACAGATCCAACTAGAAGCGAGAGATGAACAAGCCGTTCTCATTTTTTCTGATTTTG
GTTCACCGATTCAAAATCTTGGATCAATGTTGGTGACATTAACAGGTTTTGGCACCTATCCATTACAGGAACTCATTAGT
CGAAGTGGAGGGGAGCTGCGAGTATTAGTTCTGAAAGAGCGCAATGTGATTGAGCTCGCGTGGCCACTCGCCTCGATTCC
AGAGATCGAATCGCTCAAGCAAGAAGTGGTTGAAATCGAACAGAAGTCAGCCATTGATGATGTGGAAAAAGAGTGGTTGA
GTAAGCTGGAAAAGCTTATTGAGCAAAATTACAGTGATCCTAACTTTACGACATCAACGGCAGCACAATCCCTCTATGTT
TCCGAGCGTAGTTTGCAGCGTCGCTTCAAAGCCGCAACGGGAAAAACATTTAAAGAATCATTGAATGAGTTGCGTTTGGA
GAAAGCCTGCCAGAGTTTATTGAGTGGGGCAAAAATTGCTCAAGTGGCCTTTGACTGTGGATTTAATGACCCTTCCTACT
TTAGCCAACGTTTTAAACATCACTTTGGTTTATCTCCGAGTCAATTTATTGAAGATCAAGAATCTTAA

Domains

Predicted by InterproScan.

• Helix-turn-helix domain (HTH_18) (1035-1110)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tfoS	Vibrio cholerae O1 biovar El Tor strain E7946	81.631	100	0.817