Detailed information NTG0852937

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: V6T01_RS04290
• Genome accession: NZ_CP145856
• Coordinates: 848234..848941 (-)
• Length: 235 a.a.
• NCBI ID: WP_270536929.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS1
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 843234..853941

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6T01_RS04255 (V6T01_04240)	hisB	843362..843946 (+)	585	WP_002888923.1	imidazoleglycerol-phosphate dehydratase HisB	-
V6T01_RS04260 (V6T01_04245)	hisH	843943..844551 (+)	609	WP_049545184.1	imidazole glycerol phosphate synthase subunit HisH	-
V6T01_RS04265 (V6T01_04250)	hisA	844600..845319 (+)	720	WP_410541079.1	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	-
V6T01_RS04270 (V6T01_04255)	hisF	845321..846079 (+)	759	WP_002890735.1	imidazole glycerol phosphate synthase subunit HisF	-
V6T01_RS04275 (V6T01_04260)	hisI	846076..846414 (+)	339	WP_110980951.1	phosphoribosyl-AMP cyclohydrolase	-
V6T01_RS04280 (V6T01_04265)	hisE	846423..846737 (+)	315	WP_110980950.1	phosphoribosyl-ATP diphosphatase	-
V6T01_RS04285 (V6T01_04270)	-	846868..848223 (-)	1356	WP_410541078.1	sensor histidine kinase	-
V6T01_RS04290 (V6T01_04275)	scnR	848234..848941 (-)	708	WP_270536929.1	response regulator transcription factor	Regulator
V6T01_RS04295 (V6T01_04280)	-	849256..849639 (+)	384	Protein_799	ATP-binding cassette domain-containing protein	-
V6T01_RS04300 (V6T01_04285)	-	849753..850661 (+)	909	WP_410541077.1	ABC transporter ATP-binding protein	-
V6T01_RS04305 (V6T01_04290)	-	850663..851406 (+)	744	WP_410541076.1	ABC transporter permease	-
V6T01_RS04310 (V6T01_04295)	-	851408..852142 (+)	735	WP_293927447.1	ABC transporter permease	-
V6T01_RS04315 (V6T01_04300)	-	852731..852946 (+)	216	WP_410541074.1	hypothetical protein	-
V6T01_RS04320 (V6T01_04305)	-	853082..853765 (-)	684	WP_073950522.1	DUF4956 domain-containing protein	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26462.56 Da
• Isoelectric Point: 5.3800

>NTDB_id=852937 V6T01_RS04290 WP_270536929.1 848234..848941(-) (scnR) [Streptococcus salivarius strain KSS1]
MSFEIQLLNKHILIVDDDTALSESIKEVLVSRGFKNISRAYSISEGIDVVSTSHIDLIILDVMLPDGEGYLLSQYVRKNS
DIPILFLTAKNNPDDEIRGLDSGGDDYVTKPFLPKSLTYRIIALLRRAYKDESELIELTDCIIDLNNATVKKSGQNLSLT
PTEIQVLRKLYANKNYIVSTETICDTIWGLDSFGYEKSLMVHIRNIREKIELIPSKPSHLITVKGLGYKLVISTI

Nucleotide

• Length: 708 bp

>NTDB_id=852937 V6T01_RS04290 WP_270536929.1 848234..848941(-) (scnR) [Streptococcus salivarius strain KSS1]
ATGAGTTTTGAAATACAATTATTAAATAAACACATATTGATTGTGGATGATGACACAGCGTTAAGTGAATCAATTAAAGA
AGTACTTGTGAGTCGTGGTTTTAAAAACATTAGTCGTGCTTATAGTATTAGTGAAGGAATTGATGTTGTTTCAACGTCCC
ACATTGATTTAATTATTTTAGATGTAATGCTTCCAGACGGTGAAGGATATTTGCTCTCTCAATATGTGAGAAAAAACTCT
GATATTCCAATTCTATTTTTGACTGCTAAAAATAATCCTGACGACGAAATTAGGGGACTTGATTCGGGAGGAGATGACTA
CGTCACAAAGCCCTTCTTACCTAAATCTTTAACATATCGTATTATTGCACTATTAAGAAGGGCTTATAAAGATGAATCTG
AACTCATTGAACTAACCGACTGTATCATTGACTTGAACAATGCCACTGTTAAGAAAAGTGGGCAAAATCTATCGCTAACC
CCCACGGAAATCCAGGTTCTTCGAAAATTATATGCTAATAAAAACTACATTGTATCTACTGAAACAATTTGTGATACAAT
TTGGGGACTTGATAGTTTTGGATATGAGAAATCTCTAATGGTACATATTCGAAATATCCGAGAAAAGATAGAACTTATCC
CTTCTAAACCTAGTCACCTAATTACTGTCAAAGGACTTGGATATAAACTTGTTATTTCGACAATCTAA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (12-121)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (154-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	42.411	95.319	0.404
vicR	Streptococcus mutans UA159	37.991	97.447	0.37