Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   QYE84_RS09765 Genome accession   NZ_CP129369
Coordinates   1976416..1977000 (+) Length   194 a.a.
NCBI ID   WP_011276196.1    Uniprot ID   A0A2A1KAP4
Organism   Staphylococcus haemolyticus strain CJFE-402M     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1971416..1982000
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYE84_RS09735 - 1972174..1973541 (-) 1368 WP_037535514.1 isochorismate synthase -
  QYE84_RS09740 - 1973721..1974659 (+) 939 WP_053019064.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -
  QYE84_RS09745 - 1974757..1975311 (-) 555 WP_037535510.1 GNAT family N-acetyltransferase -
  QYE84_RS09750 - 1975496..1975726 (+) 231 WP_011276193.1 TM2 domain-containing protein -
  QYE84_RS09755 - 1975806..1975907 (+) 102 WP_011276194.1 SAR1012 family small protein -
  QYE84_RS09760 - 1975984..1976202 (-) 219 WP_037535507.1 IDEAL domain-containing protein -
  QYE84_RS09765 comK/comK1 1976416..1977000 (+) 585 WP_011276196.1 competence protein ComK Regulator
  QYE84_RS09780 - 1977581..1978132 (+) 552 WP_053017801.1 Ltp family lipoprotein -
  QYE84_RS09785 - 1978179..1979168 (-) 990 WP_053017797.1 lipoate--protein ligase -
  QYE84_RS09790 - 1979369..1979545 (+) 177 WP_011276202.1 DUF2187 family protein -
  QYE84_RS09795 - 1979562..1980164 (+) 603 WP_053019062.1 CPBP family glutamic-type intramembrane protease -
  QYE84_RS09800 - 1980248..1981759 (-) 1512 WP_053017793.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 23002.43 Da        Isoelectric Point: 9.2942

>NTDB_id=852867 QYE84_RS09765 WP_011276196.1 1976416..1977000(+) (comK/comK1) [Staphylococcus haemolyticus strain CJFE-402M]
MTNISQSQNTVYIIRKGDMIIKPVIDDYEQTKGSEIWKYDSTIVSSPFKTQKIVERSCKFYGNSYISKKSETQRIAGITS
KPPILLTPLFPTYFFPTHSDRLEENMWINMHYVHEIKPLKNRKCKIIFANHQTLTLNVSYHSIWHQYSNCIFYYYMVDKQ
SRMKSNNPEMPIDYEKTTLNIFEALSHYSLLQDK

Nucleotide


Download         Length: 585 bp        

>NTDB_id=852867 QYE84_RS09765 WP_011276196.1 1976416..1977000(+) (comK/comK1) [Staphylococcus haemolyticus strain CJFE-402M]
ATGACAAATATTTCTCAAAGCCAAAATACTGTATATATTATTCGAAAAGGAGATATGATAATCAAACCCGTCATTGATGA
TTATGAGCAAACAAAAGGATCAGAAATATGGAAATATGATTCCACAATAGTTTCAAGCCCGTTTAAAACTCAAAAAATCG
TCGAACGCTCATGTAAATTTTATGGTAATAGCTATATTAGTAAGAAATCCGAAACACAACGAATTGCCGGCATTACTAGT
AAACCACCTATTTTATTGACTCCTCTCTTCCCCACTTATTTTTTCCCTACGCATTCAGACCGTTTAGAAGAAAACATGTG
GATTAATATGCATTATGTACATGAAATTAAACCTCTTAAAAATCGAAAATGTAAAATTATTTTTGCAAATCATCAAACAT
TAACACTTAATGTTTCCTACCACAGTATTTGGCACCAATACTCTAACTGCATTTTTTATTATTACATGGTCGATAAACAA
TCTCGTATGAAGTCAAACAATCCAGAAATGCCAATTGATTATGAGAAAACGACTTTAAATATTTTCGAAGCACTTTCACA
TTATTCACTATTACAAGATAAATAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(11-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A1KAP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

68.617

96.907

0.665
  comK/comK1 Staphylococcus aureus N315

68.617

96.907

0.665