Detailed information NTG0852860

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QYE84_RS06860
• Genome accession: NZ_CP129369
• Coordinates: 1396815..1397789 (+)
• Length: 324 a.a.
• NCBI ID: WP_053018269.1
• Uniprot ID: -
• Organism: Staphylococcus haemolyticus strain CJFE-402M
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1391815..1402789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYE84_RS06825	rpmG	1392248..1392397 (+)	150	WP_011275661.1	50S ribosomal protein L33	-
QYE84_RS06830	-	1392633..1393169 (+)	537	WP_053041566.1	5-formyltetrahydrofolate cyclo-ligase	-
QYE84_RS06835	-	1393185..1394642 (+)	1458	WP_053018267.1	rhomboid family intramembrane serine protease	-
QYE84_RS06840	-	1394626..1394829 (+)	204	WP_037536577.1	YqgQ family protein	-
QYE84_RS06845	-	1394826..1395812 (+)	987	WP_037536575.1	ROK family glucokinase	-
QYE84_RS06850	-	1395812..1396135 (+)	324	WP_011275666.1	MTH1187 family thiamine-binding protein	-
QYE84_RS06855	-	1396137..1396763 (+)	627	WP_053018268.1	MBL fold metallo-hydrolase	-
QYE84_RS06860	comGA	1396815..1397789 (+)	975	WP_053018269.1	competence type IV pilus ATPase ComGA	Machinery gene
QYE84_RS06865	comGB	1397761..1398825 (+)	1065	WP_053018270.1	competence type IV pilus assembly protein ComGB	-
QYE84_RS06870	comGC	1398839..1399159 (+)	321	WP_011275670.1	competence type IV pilus major pilin ComGC	Machinery gene
QYE84_RS06875	comGD	1399149..1399592 (+)	444	WP_016931110.1	competence type IV pilus minor pilin ComGD	-
QYE84_RS06880	-	1399573..1399872 (+)	300	WP_053018271.1	hypothetical protein	-
QYE84_RS06885	-	1400441..1400959 (+)	519	WP_053018273.1	shikimate kinase	-
QYE84_RS06890	gcvT	1401148..1402239 (+)	1092	WP_301401154.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37133.06 Da
• Isoelectric Point: 8.4438

>NTDB_id=852860 QYE84_RS06860 WP_053018269.1 1396815..1397789(+) (comGA) [Staphylococcus haemolyticus strain CJFE-402M]
MKLLFREIVNKAISKNASDIHFIPSVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSQQSAQSGRYTYQS
KSTFYLRISTLPLSLGIESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYISSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKTQIQYFFEHEQTMPHNFNNLQQQLNLLSKEGTICEDTA
SKYF

Nucleotide

• Length: 975 bp

>NTDB_id=852860 QYE84_RS06860 WP_053018269.1 1396815..1397789(+) (comGA) [Staphylococcus haemolyticus strain CJFE-402M]
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCAATTTCAAAAAATGCGAGCGACATACATTTTATCCCTTCAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTACCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGCTTGGACGTTTCATCTCAACAATCCGCTCAAAGTGGTCGTTATACTTATCAATCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTATAGAAAGTTGTGTAATTAGGATAATTCCCCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAATGATTTTAAACACTTAGTAAATAAAAAGCAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGCAAAAGTACTCTAATGTATCAAATGGTTCTACACGCATATAAAGAATTAAATCTTAAT
GTTATCACTATCGAAAACCCAGTTGAGCAATTACTAAAAGGCATTACCCAAATATCAATAAATAAAAAGGCAGGTATAGA
CTACATAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTTATTCAAGCTAGTTTGAGTGGACATCTTGTATTATCAACCATGCACTCTACTAATTGTAGAGGTGCATTA
CTTCGGTTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCTATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAAAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAACGCAGATACAATATTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTACAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (8-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	65.635	99.691	0.654
comGA	Staphylococcus aureus N315	65.635	99.691	0.654